RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 FAR2Q96K12 515 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 PAFAH2Q99487 392 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 SLC6A16Q9GZN6 736 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 VN1R1Q9GZP7 353 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 VPS11Q9H270 941 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 EPS8L2Q9H6S3 715 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 NT5DC2Q9H857 520 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 OPTCQ9UBM4 332 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 FASNP49327 2511 aaKnown RBP16.68■□□□□ 0.26
HDAC4-211ENST00000494800 MDC1Q14676 2089 aaKnown RBP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 LOC102723996A0A087X1L8 192 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 IGHV1-45A0A0A0MS14 117 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 A0A1W2PQ72 361 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF860A6NHJ4 632 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 POC1B-GALNT4F8VUJ3 575 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 MASP2O00187 686 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 PSMD12O00232 456 aaPredicted RBP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 KLHL2O95198 593 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 RHOXF2BP0C7M4 288 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 COX6A1P12074 109 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 GFAPP14136 432 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 HNF4AP41235 474 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 IRF8Q02556 426 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 DLG1Q12959 904 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 FBXO48Q5FWF7 155 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 TOR1AIP1Q5JTV8 583 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 TMEM205Q6UW68 189 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 RIPOR1Q6ZS17 1223 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 TRMT10CQ7L0Y3 403 aaKnown RBP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ATCAYQ86WG3 371 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 UTP15Q8TED0 518 aaKnown RBP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 UBE2E3Q969T4 207 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 PEX11GQ96HA9 241 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ATOH8Q96SQ7 321 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 RHOXF2Q9BQY4 288 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 TUBB6Q9BUF5 446 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 MFRPQ9BY79 579 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ILKAPQ9H0C8 392 aaPredicted RBP16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF700Q9H0M5 742 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 CLMPQ9H6B4 373 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 B3GNT3Q9Y2A9 372 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 ANGPTL3Q9Y5C1 460 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 PCSK5Q92824 1860 aa16.67■□□□□ 0.26
HDAC4-211ENST00000494800 EXOC1LA0A1B0GW35 172 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 PYCARD-AS1I3L0S3 204 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 K7EPI3 171 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 UBXN8O00124 270 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 JRKO75564 520 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 CLEC3AO75596 197 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 ALDOAP04075 364 aaKnown RBP16.66■□□□□ 0.26
HDAC4-211ENST00000494800 SERPINA7P05543 415 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 EPB42P16452 691 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 GLRBP48167 497 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 RAB8AP61006 207 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 IRF9Q00978 393 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 TGM3Q08188 693 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 TBCCQ15814 346 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 SLC6A19Q695T7 634 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 CENPLQ8N0S6 344 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-211ENST00000494800 CNPY4Q8N129 248 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 CREB3L4Q8TEY5 395 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 UBTD2Q8WUN7 234 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 GAL3ST3Q96A11 431 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 ESAMQ96AP7 390 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 TBC1D20Q96BZ9 403 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 COPG2Q9UBF2 871 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF180Q9UJW8 692 aa16.66■□□□□ 0.26
HDAC4-211ENST00000494800 GCN1Q92616 2671 aaKnown RBP16.66■□□□□ 0.26
HDAC4-211ENST00000494800 ANKRD12Q6UB98 2062 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 HMX2A2RU54 273 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CHST10O43529 356 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 WFS1O76024 890 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 FHP07954 510 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 ABHD2P08910 425 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 GMPRP36959 345 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 KCNC1P48547 511 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 MLLT10P55197 1068 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 SNRPNP63162 240 aaKnown RBP16.65■□□□□ 0.26
HDAC4-211ENST00000494800 FOXK1P85037 733 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CHIT1Q13231 466 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 DOC2AQ14183 400 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 NSDHLQ15738 373 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 TSNAXIP1Q2TAA8 658 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CRB2Q5IJ48 1285 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 ISLR2Q6UXK2 745 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CPEB2Q7Z5Q1 589 aaKnown RBP16.65■□□□□ 0.26
HDAC4-211ENST00000494800 RBMXL3Q8N7X1 1067 aaKnown RBP16.65■□□□□ 0.26
HDAC4-211ENST00000494800 OR5T3Q8NGG3 340 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CPT1CQ8TCG5 803 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 WDR34Q96EX3 536 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 RBCK1Q9BYM8 510 aa16.65■□□□□ 0.26
HDAC4-211ENST00000494800 TNPO3Q9Y5L0 923 aaKnown RBP16.65■□□□□ 0.26
HDAC4-211ENST00000494800 CDC123O75794 336 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 SORBS2O94875 1100 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 RBP1P09455 135 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 PRR35P0CG20 571 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 COL6A2P12110 1019 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms