RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 NPY6RQ99463 290 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 NFKBIZQ9BYH8 718 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 DDX31Q9H8H2 851 aaKnown RBP4.63□□□□□ -1.67
PRKD3-210ENST00000494667 GALNT9Q9HCQ5 603 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 MRPS18AQ9NVS2 196 aaKnown RBP4.63□□□□□ -1.67
PRKD3-210ENST00000494667 WDR70Q9NW82 654 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 ACTR10Q9NZ32 417 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 KLHL8Q9P2G9 620 aaPredicted RBP4.63□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF225Q9UK10 706 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 PCTPQ9UKL6 214 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 TSPAN16Q9UKR8 245 aa4.63□□□□□ -1.67
PRKD3-210ENST00000494667 LOC285095A0A1B0GVY8 99 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ASB14A6NK59 587 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MYO1GB0I1T2 1018 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SERPINA1P01009 418 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 IGHV2-70P01814 119 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ESR1P03372 595 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CYP17A1P05093 508 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 STSP08842 583 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SLC2A2P11168 524 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ANXA8P13928 327 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 STARP49675 285 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 STK19P49842 368 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MECP2P51608 486 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CLCN4P51793 760 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 GTF2A2P52657 109 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ST3GAL4Q11206 333 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PCBP1Q15365 356 aaKnown RBP eCLIP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MPEG1Q2M385 716 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TRIM60Q495X7 471 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MTERF2Q49AM1 385 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ANKRD39Q53RE8 183 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DNLZQ5SXM8 178 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FUT10Q6P4F1 479 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 Q6ZSR9 355 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ADGRD2Q7Z7M1 963 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MIB1Q86YT6 1006 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 FAM126BQ8IXS8 530 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 LAS2Q8IYD9 372 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 NANOGP1Q8N7R0 232 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PTGR2Q8N8N7 351 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DNAAF3Q8N9W5 541 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TMIEQ8NEW7 156 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ELP5Q8TE02 316 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ACOT12Q8WYK0 555 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CDKN2AIPNLQ96HQ2 116 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ERMAPQ96PL5 475 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MAPKAP1Q9BPZ7 522 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SEC22CQ9BRL7 303 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DPH7Q9BTV6 452 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TRIM8Q9BZR9 551 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 RNF122Q9H9V4 155 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 B3GAT2Q9NPZ5 323 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 IKZF3Q9UKT9 509 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ABCG2Q9UNQ0 655 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DERAQ9Y315 318 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 RLFQ13129 1914 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PATJQ8NI35 1801 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SCN8AQ9UQD0 1980 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SERTM1A2A2V5 107 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PIPSLA2A3N6 862 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CARNS1A5YM72 827 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TRABD2BA6NFA1 517 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DBX1A6NMT0 343 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PRKYO43930 277 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SSX5O60225 188 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TNFRSF21O75509 655 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 AQP8O94778 261 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PRAMEF1O95521 474 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 EPOP01588 193 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PRPH2P23942 346 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 PSMA1P25786 263 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 RFC3P40938 356 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 HMGA2P52926 109 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 IL10RBQ08334 325 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 DOC2BQ14184 412 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ZMYND11Q15326 602 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TEAD4Q15561 434 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SLC30A6Q6NXT4 461 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 UQCC3Q6UW78 93 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 QSOX2Q6ZRP7 698 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 UTS2BQ765I0 119 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SCUBE3Q8IX30 993 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ADGRG2Q8IZP9 1017 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SPICQ8N5J4 248 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 C1orf127Q8N9H9 656 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ATG16L2Q8NAA4 619 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 NETO1Q8TDF5 533 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 UTP23Q9BRU9 249 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 YIPF4Q9BSR8 244 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TTPALQ9BTX7 342 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MND1Q9BWT6 205 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 CPEB1Q9BZB8 566 aaKnown RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 GPR63Q9BZJ6 419 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 MED28Q9H204 178 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 SERHLQ9NQF3 203 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 TCEAL9Q9UHQ7 104 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 HACL1Q9UJ83 578 aa4.62□□□□□ -1.67
PRKD3-210ENST00000494667 ZNF490Q9ULM2 529 aaPredicted RBP4.62□□□□□ -1.67
PRKD3-210ENST00000494667 JAG2Q9Y219 1238 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms