RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ANKRD49Q8WVL7 239 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 TM9SF4Q92544 642 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 C8orf44Q96CB5 159 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 HIST1H2AHQ96KK5 128 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 GPR78Q96P69 363 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 IP6K3Q96PC2 410 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SPSB2Q99619 263 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 HIST1H2AJQ99878 128 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SLX1AQ9BQ83 275 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 H2AFJQ9BTM1 129 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 NSRP1Q9H0G5 558 aaKnown RBP11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 CCDC134Q9H6E4 229 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 ALG9Q9H6U8 611 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 TMEM216Q9P0N5 145 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SLC17A7Q9P2U7 560 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 CTSFQ9UBX1 484 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 SH3BGRL2Q9UJC5 107 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 OARD1Q9Y530 152 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
CSNK1E-212ENST00000494610 DNHD1Q96M86 4753 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 A0A0J9YY10 115 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ISM1B1AKI9 464 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 SUPT3HB4E1H0 165 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 KLF11O14901 512 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MAP3K7O43318 606 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ZBTB14O43829 449 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 NRP2O60462 931 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 SUPT3HO75486 399 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 JRKO75564 520 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 IPO13O94829 963 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 BPGMP07738 259 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 CELA2AP08217 269 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 STSP08842 583 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 GFAPP14136 432 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MAGP20916 626 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 TSFMP43897 325 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 GCGRP47871 477 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 KRTAP10-9P60411 292 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 DLG1Q12959 904 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 CDSNQ15517 529 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 NKG7Q16617 165 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ACSBG2Q5FVE4 666 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 AGAP7PQ5VUJ5 663 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 LIPMQ5VYY2 423 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 METTL2BQ6P1Q9 378 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 TMEM207Q6UWW9 146 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 PIWIL4Q7Z3Z4 852 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 NUDCD3Q8IVD9 361 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 PLD6Q8N2A8 252 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 RAB42Q8N4Z0 105 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 FBXO15Q8NCQ5 510 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 OR1N1Q8NGS0 311 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 PROKR1Q8TCW9 393 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MCOLN3Q8TDD5 553 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ATL1Q8WXF7 558 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MOCOSQ96EN8 888 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MAGEB10Q96LZ2 347 aaPredicted RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 AGAP4Q96P64 663 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 IL17FQ96PD4 163 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 SLC30A3Q99726 388 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 NDC1Q9BTX1 674 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MVB12BQ9H7P6 319 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 EMCNQ9ULC0 261 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ASF1AQ9Y294 204 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 STK38LQ9Y2H1 464 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 TNPO3Q9Y5L0 923 aaKnown RBP11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 AP1M2Q9Y6Q5 423 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 MAU2Q9Y6X3 613 aa11.18□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF469Q96JG9 3925 aaPredicted RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 KRT87PA6NCN2 255 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ZNF839A8K0R7 811 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TMEM114B3SHH9 223 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 STX16-NPEPL1H3BU86 382 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 STX16O14662 325 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 FFAR3O14843 346 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 GPR42O15529 346 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TRIM13O60858 407 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PSIP1O75475 530 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 MATN4O95460 622 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 SERPINE1P05121 402 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ANXA5P08758 320 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 MMP11P24347 488 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ACADLP28330 430 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ALDH3A1P30838 453 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PIK3CGP48736 1102 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 HNMTP50135 292 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ST13P50502 369 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 TDGF1P3P51864 188 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 ALDH18A1P54886 795 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 PER3P56645 1201 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 WDR4P57081 412 aaKnown RBP11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 DNAJB13P59910 316 aa11.17□□□□□ -0.62
CSNK1E-212ENST00000494610 MPP2Q14168 576 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms