RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 NUDT7P0C024 238 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 SLC2A2P11168 524 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 INSRRP14616 1297 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 AQP1P29972 269 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GBX2P52951 348 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 OAZ1P54368 228 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 VMACQ2NL98 169 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LGALSLQ3ZCW2 172 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 USP39Q53GS9 565 aaKnown RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LIPKQ5VXJ0 399 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 AFMIDQ63HM1 303 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 C22orf42Q6IC83 251 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 MRNIPQ6NTE8 343 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PLPPR4Q7Z2D5 763 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LIMS2Q7Z4I7 341 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 FAM83AQ86UY5 434 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 DENND6BQ8NEG7 585 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 SLC9A6Q92581 669 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LINGO1Q96FE5 620 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PPP3R2Q96LZ3 170 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 CRISPLD1Q9H336 500 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GMEB2Q9UKD1 530 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 MAPRE3Q9UPY8 281 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 CDH10Q9Y6N8 788 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 IQCF5A8MTL0 148 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 INMT-MINDY4F8WBC2 141 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 KHNYNO15037 678 aaKnown RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ACSL4O60488 711 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PAGE1O75459 146 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 RPP40O75818 363 aaKnown RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LRATO95237 230 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 IFNA16P05015 189 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 HOXB3P14651 431 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 CXCL3P19876 107 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 HOXA11P31270 313 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GDF5P43026 501 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PGFP49763 221 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 BACE1P56817 501 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ZXDBP98169 803 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 CYP4F8P98187 520 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PPIGQ13427 754 aaKnown RBP eCLIP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GTF2H2Q13888 395 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GNA13Q14344 377 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GPR68Q15743 365 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PTPRNQ16849 979 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 MANEALQ5VSG8 457 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 WSCD1Q658N2 575 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GTF2H2CQ6P1K8 395 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 LRFN4Q6PJG9 635 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 PDZD3Q86UT5 571 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 RGL4Q8IZJ4 473 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 GHDCQ8N2G8 530 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 TMEM132CQ8N3T6 1108 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ZNF655Q8N720 491 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ANKRD53Q8N9V6 530 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 OR10G2Q8NGC3 310 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 OR6M1Q8NGM8 313 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 C9orf43Q8TAL5 461 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ARRDC2Q8TBH0 407 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ASIC4Q96FT7 647 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 EXOC2Q96KP1 924 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 SOSTQ9BQB4 213 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 REG4Q9BYZ8 158 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 IPPKQ9H8X2 491 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 AGO3Q9H9G7 860 aaKnown RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 TXNL4BQ9NX01 149 aaKnown RBP9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ELOVL2Q9NXB9 296 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 SH3BP4Q9P0V3 963 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 STUB1Q9UNE7 303 aa9.76□□□□□ -0.85
LINC00488-201ENST00000494582 ALPK3Q96L96 1907 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 PRAMEF25A6NGN4 478 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 HHLA1C9JL84 531 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 HRGP04196 525 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 PROS1P07225 676 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 ACSM4P0C7M7 580 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 EDNRBP24530 442 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 SDC2P34741 201 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 C2orf80Q0P641 193 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 TEAD4Q15561 434 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 TTLL9Q3SXZ7 439 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 KLHL22Q53GT1 634 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 MSANTD2Q6P1R3 559 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 CNIH2Q6PI25 160 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 CHMP1BQ7LBR1 199 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 BCDIN3DQ7Z5W3 292 aaKnown RBP9.75□□□□□ -0.85
LINC00488-201ENST00000494582 KIAA0907Q7Z7F0 614 aaPredicted RBP9.75□□□□□ -0.85
LINC00488-201ENST00000494582 DDX53Q86TM3 631 aaKnown RBP9.75□□□□□ -0.85
LINC00488-201ENST00000494582 LINC01465Q8N7H1 131 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 OR9Q1Q8NGQ5 310 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 SIPA1Q96FS4 1042 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 TNIP3Q96KP6 325 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 SPATA33Q96N06 139 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 SHARPINQ9H0F6 387 aa9.75□□□□□ -0.85
LINC00488-201ENST00000494582 SLC28A3Q9HAS3 691 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms