RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TBX5Q99593 518 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 AASSQ9UDR5 926 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 CYTH4Q9UIA0 394 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 MID1O15344 667 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 TPD52L2O43399 206 aaKnown RBP18.53■□□□□ 0.56
COL27A1-207ENST00000494090 GRID2O43424 1007 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 BMP8BP34820 402 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 NUDT6P53370 316 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 SLC10A2Q12908 348 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-207ENST00000494090 DLK2Q6UY11 383 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 BMP8AQ7Z5Y6 402 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 TMEM135Q86UB9 458 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 UMODL1-AS1Q8N2C9 162 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 HDAC2Q92769 488 aaKnown RBP18.53■□□□□ 0.56
COL27A1-207ENST00000494090 MRGPRX2Q96LB1 330 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 TMEM165Q9HC07 324 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 S100A6P06703 90 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 PRKACGP22612 351 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 DCDC1P59894 354 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 NFATC2Q13469 925 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 GRHL3Q8TE85 626 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 FRMD6Q96NE9 622 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 ERMAPQ96PL5 475 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-207ENST00000494090 KLRF1Q9NZS2 232 aa18.53■□□□□ 0.56
COL27A1-207ENST00000494090 AHSA1O95433 338 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 GP1BBP13224 206 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 AGTR2P50052 363 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 APLP1P51693 650 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 DIO3P55073 304 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 ARFRP1Q13795 201 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 CYBRD1Q53TN4 286 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 GPRC6AQ5T6X5 926 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 GMLQ99445 158 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 RAB36O95755 333 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 RPS13P62277 151 aaKnown RBP18.52■□□□□ 0.56
COL27A1-207ENST00000494090 THOC7Q6I9Y2 204 aaKnown RBP18.52■□□□□ 0.56
COL27A1-207ENST00000494090 CEP97Q8IW35 865 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 NKD1Q969G9 470 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 PCDHB16Q9NRJ7 776 aa18.52■□□□□ 0.56
COL27A1-207ENST00000494090 CCM2LQ9NUG4 571 aaPredicted RBP18.52■□□□□ 0.56
COL27A1-207ENST00000494090 ENTPD6O75354 484 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 SNAI1O95863 264 aaPredicted RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 C7P10643 843 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 CHRM1P11229 460 aaPredicted RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 GJA1P17302 382 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 GADD45AP24522 165 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 CCND3P30281 292 aaPredicted RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 ATG9BQ674R7 924 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 FIP1L1Q6UN15 594 aaKnown RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 GRASPQ7Z6J2 395 aaPredicted RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 KLHDC7BQ96G42 594 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 KCNH6Q9H252 994 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 PTGES2Q9H7Z7 377 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF224Q9NZL3 707 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 PGAM2P15259 253 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 IVDP26440 423 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 UPP1Q16831 310 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 WSCD2Q2TBF2 565 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 ARMC10Q8N2F6 343 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 ADAD1Q96M93 576 aaKnown RBP18.52■□□□□ 0.55
COL27A1-207ENST00000494090 TRIM36Q9NQ86 728 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 MKLN1Q9UL63 735 aa18.52■□□□□ 0.55
COL27A1-207ENST00000494090 FAM170BA6NMN3 283 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 A8MUA0 341 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 DIRAS1O95057 198 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 CYP17A1P05093 508 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 SLC35E2BP0CK96 405 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 RBM34P42696 430 aaKnown RBP18.51■□□□□ 0.55
COL27A1-207ENST00000494090 SLC15A1P46059 708 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 NRIP1P48552 1158 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 DUSP3P51452 185 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-207ENST00000494090 RING1Q06587 406 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 NIPAL4Q0D2K0 466 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 PON3Q15166 354 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF404Q494X3 552 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 TXLNGYQ9BZA5 131 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 MS4A12Q9NXJ0 267 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 RNF6Q9Y252 685 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 KLHL33A6NCF5 533 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 PCDHGA12O60330 932 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 CLEC3AO75596 197 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 TRIB3Q96RU7 358 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 CENPMQ9NSP4 180 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 HCN4Q9Y3Q4 1203 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 A0A0D9SEW6 157 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 ENDOUP21128 410 aaKnown RBP18.51■□□□□ 0.55
COL27A1-207ENST00000494090 HTR1EP28566 365 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 LMX1AQ8TE12 382 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 JUNP05412 331 aaKnown RBP18.51■□□□□ 0.55
COL27A1-207ENST00000494090 HNRNPA1P09651 372 aaKnown RBP eCLIP18.51■□□□□ 0.555e-6■□□□□ 10.4
COL27A1-207ENST00000494090 SLC6A9P48067 706 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 FAM214AQ32MH5 1076 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 OR4E2Q8NGC2 313 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 NXPE2Q96DL1 559 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 CD180Q99467 661 aa18.51■□□□□ 0.55
COL27A1-207ENST00000494090 HLA-DPB1P04440 258 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 KBTBD6Q86V97 674 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 ARMC5Q96C12 935 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 TMEM80Q96HE8 168 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms