RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 VN1R2Q8NFZ6 395 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 TBC1D15Q8TC07 691 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 C16orf78Q8WTQ4 265 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 MYLIPQ8WY64 445 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 FCGR1BQ92637 280 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ARMC5Q96C12 935 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 HDAC8Q9BY41 377 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 GABARAPL3Q9BY60 117 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 MTIF3Q9H2K0 278 aaKnown RBP9.27□□□□□ -0.93
NPHP3-209ENST00000493732 MTG2Q9H4K7 406 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PELI2Q9HAT8 420 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 NECTIN3Q9NQS3 549 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 OBP2AQ9NY56 170 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 SPASTQ9UBP0 616 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ENPP5Q9UJA9 477 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 ICKQ9UPZ9 632 aa9.27□□□□□ -0.93
NPHP3-209ENST00000493732 PTPRSQ13332 1948 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 KRT87PA6NCN2 255 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 YY2O15391 372 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 RGS10O43665 173 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 TBX19O60806 448 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 TNFRSF21O75509 655 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 PAPLNO95428 1278 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 AGXTP21549 392 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 PCMT1P22061 227 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 CHI3L1P36222 383 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 STT3AP46977 705 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 SERPINB10P48595 397 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ENTPD1P49961 510 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 C21orf59P57076 290 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 KCNJ10P78508 379 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 PPP1R8Q12972 351 aaKnown RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 MAD2L1BPQ15013 274 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 NPTX1Q15818 432 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 POM121L1PQ3SYA9 428 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 CATSPEREQ5SY80 951 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 FBXO46Q6PJ61 603 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 PRSS48Q7RTY5 328 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 GALNT5Q7Z7M9 940 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 PDZD3Q86UT5 571 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 AMZ2Q86W34 360 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 LRRC56Q8IYG6 542 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 NAGSQ8N159 534 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 DEPDC4Q8N2C3 294 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 LILRA3Q8N6C8 439 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 DRAXINQ8NBI3 349 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 GIPC3Q8TF64 312 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 TRUB1Q8WWH5 349 aaKnown RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ING5Q8WYH8 240 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 SUSD6Q92537 303 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ARRDC3Q96B67 414 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF707Q96C28 371 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 HRASLS5Q96KN8 279 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 DPH2Q9BQC3 489 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-209ENST00000493732 AIF1LQ9BQI0 150 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 SLC35A5Q9BS91 424 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 FUNDC2Q9BWH2 189 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 NT5DC2Q9H857 520 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 MIEF1Q9NQG6 463 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 THSD1Q9NS62 852 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 VNN3Q9NY84 501 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 GULP1Q9UBP9 304 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ANGPT4Q9Y264 503 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ITM2BQ9Y287 266 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 ASF1AQ9Y294 204 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 B3GNT3Q9Y2A9 372 aa9.26□□□□□ -0.93
NPHP3-209ENST00000493732 A0A0J9YVX5 310 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 A0A1W2PRB8 838 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ANKDD1BA6NHY2 528 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TNFRSF11BO00300 401 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SPINT1O43278 529 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NTRK1P04629 796 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 HTR1AP08908 422 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF182P17025 639 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF8P17098 575 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 EFNA1P20827 205 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 UQCRC2P22695 453 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CLK3P49761 638 aaKnown RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 HBA1P69905 142 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 EMX1Q04741 257 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 GAB1Q13480 694 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TSTA3Q13630 321 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SCARB2Q14108 478 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CRB2Q5IJ48 1285 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SYT6Q5T7P8 510 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 MLIPQ5VWP3 458 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 LAIR2Q6ISS4 152 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 KLHL35Q6PF15 583 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FAM92BQ6ZTR7 304 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NUDT18Q6ZVK8 323 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ARMCX6Q7L4S7 300 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 B3GNT8Q7Z7M8 397 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 C17orf64Q86WR6 236 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ARMC8Q8IUR7 673 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 P3H2Q8IVL5 708 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF540Q8NDQ6 660 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SPPL2AQ8TCT8 520 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 GEMIN6Q8WXD5 167 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms