RNA–Protein interactions for RNA: ENST00000491519.4

SATB1-216, Transcript of SATB homeobox 1, humanhuman

TSL 2 BASIC

Gene SATB1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-216ENST00000491519 HPCAL4Q9UM19 191 aa3.59□□□□□ -1.83
SATB1-216ENST00000491519 MRPL11Q9Y3B7 192 aaKnown RBP3.59□□□□□ -1.83
SATB1-216ENST00000491519 TMED3Q9Y3Q3 217 aa3.59□□□□□ -1.83
SATB1-216ENST00000491519 PIK3C2GO75747 1445 aa3.59□□□□□ -1.84
SATB1-216ENST00000491519 VCANP13611 3396 aa3.59□□□□□ -1.84
SATB1-216ENST00000491519 RBBP6Q7Z6E9 1792 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 TRPM7Q96QT4 1865 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 DICER1Q9UPY3 1922 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 A0A087WV48 116 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 A0A1W2PPW3 197 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 SLC7A4O43246 635 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 XPNPEP2O43895 674 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TSC22D2O75157 780 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PRKRAO75569 313 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 STAM2O75886 525 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 LUC7L3O95232 432 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 VIMP08670 466 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 TCF4P15884 667 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 HLA-DPA1P20036 260 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 MAPK3P27361 379 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 TMOD1P28289 359 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PTGER4P35408 488 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 NAGLUP54802 743 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 HUNKP57058 714 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 POLR2FP61218 127 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 DLK1P80370 383 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 MECOMQ03112 1051 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ITGA7Q13683 1181 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PTK6Q13882 451 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TUBB2AQ13885 445 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PPA1Q15181 289 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 SYCP1Q15431 976 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ZRSR1Q15695 479 aaKnown RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 UGCGQ16739 394 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 SHROOM1Q2M3G4 852 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 ITPRIPL2Q3MIP1 535 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 FILIP1LQ4L180 1135 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 DCAF10Q5QP82 559 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 RAB12Q6IQ22 244 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ENPP7Q6UWV6 458 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ANGPTL8Q6UXH0 198 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 MSANTD1Q6ZTZ1 278 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TMEM110Q86TL2 294 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 KLHL7Q8IXQ5 586 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 LGI2Q8N0V4 545 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 EID3Q8N140 333 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 RFLNBQ8N5W9 214 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TMCO5AQ8N6Q1 288 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 DRAXINQ8NBI3 349 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 SPC24Q8NBT2 197 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 CTCFLQ8NI51 663 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 VANGL1Q8TAA9 524 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 GRHL3Q8TE85 626 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PROX1Q92786 737 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 EXOC4Q96A65 974 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ZNF354BQ96LW1 612 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 RHNO1Q9BSD3 238 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TUBB2BQ9BVA1 445 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 TEX13BQ9BXU2 312 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 SLC2A11Q9BYW1 496 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 SNX25Q9H3E2 840 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 COPS7BQ9H9Q2 264 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 SDF2L1Q9HCN8 221 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 GKN1Q9NS71 199 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 EXOC1Q9NV70 894 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 COQ3Q9NZJ6 369 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ZNF624Q9P2J8 865 aaPredicted RBP3.58□□□□□ -1.84
SATB1-216ENST00000491519 CLIP2Q9UDT6 1046 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 ZDHHC2Q9UIJ5 367 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
SATB1-216ENST00000491519 PRR23AA6NEV1 266 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 CCDC169A6NNP5 214 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 MCF2LO15068 1137 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 TXNL1O43396 289 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 FGF17O60258 216 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 PRKNO60260 465 aaPredicted RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 RPS6KA5O75582 802 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 KRT36O76013 467 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 OPN1MWP04001 364 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 TPM3P06753 285 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 ZFYP08048 801 aaPredicted RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 FAM58BPP0C7Q3 252 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 OPN1MW2P0DN77 364 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 OPN1MW3P0DN78 364 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 HAPLN1P10915 354 aaPredicted RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 HSPA5P11021 654 aaKnown RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 GZMAP12544 262 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 CASTP20810 708 aaKnown RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 CD9P21926 228 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 RFC4P35249 363 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 EPS15P42566 896 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 GSDMDP57764 484 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 ZNF415Q09FC8 603 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 ODF4Q2M2E3 257 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 UGT3A2Q3SY77 523 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 RABL6Q3YEC7 729 aaPredicted RBP3.57□□□□□ -1.84
SATB1-216ENST00000491519 LRRC73Q5JTD7 316 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 CCDC122Q5T0U0 273 aa3.57□□□□□ -1.84
SATB1-216ENST00000491519 CCNYL2Q5T2Q4 361 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms