RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CXCL9Q07325 125 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 SF3A2Q15428 464 aaKnown RBP10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 CAPN13Q6MZZ7 669 aaPredicted RBP10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 OR2T35Q8NGX2 323 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 NEIL3Q8TAT5 605 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 TNFAIP8L1Q8WVP5 186 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 PCNPQ8WW12 178 aaKnown RBP10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC35C2Q9NQQ7 365 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 RAI2Q9Y5P3 530 aa10.92□□□□□ -0.66
CRNKL1-204ENST00000490910 TRBC2A0A5B9 178 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC19A2O60779 497 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PROS1P07225 676 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 NR2F1P10589 423 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CRISP1P54107 249 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 FAM189BP81408 668 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 NXNL2Q5VZ03 156 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 Q6ZPB1 254 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC51BQ86UW2 128 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PCYT2Q99447 389 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 FUZQ9BT04 418 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 TUBB1Q9H4B7 451 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RBFOX1Q9NWB1 397 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 A8MUA0 341 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 HAS3O00219 553 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ARHGAP33O14559 1287 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC9A3R1O14745 358 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ENTPD6O75354 484 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RAB36O95755 333 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 GRK4P32298 578 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KCNC1P48547 511 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PCBP1Q15365 356 aaKnown RBP eCLIP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SWI5Q1ZZU3 235 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ANKS3Q6ZW76 656 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CEP68Q76N32 757 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CARNMT1Q8N4J0 409 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ZNF655Q8N720 491 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 BTN2A2Q8WVV5 523 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 TMEM159Q96B96 161 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 C12orf66Q96MD2 445 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 HDHD5Q9BXW7 423 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RBCK1Q9BYM8 510 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ATG10Q9H0Y0 220 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 POLE3Q9NRF9 147 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KCTD5Q9NXV2 234 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 MYO10Q9HD67 2058 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SMLR1H3BR10 107 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 M0R129 80 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KPNA3O00505 521 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PCDHGA12O60330 932 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 REM1O75628 298 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CATP04040 527 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KELP23276 732 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 LARS2Q15031 903 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 COL28A1Q2UY09 1125 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC39A12Q504Y0 691 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CDKL4Q5MAI5 379 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ADNP2Q6IQ32 1131 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CFAP77Q6ZQR2 320 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 MON1AQ86VX9 555 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CHCHD4Q8N4Q1 142 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KCNJ9Q92806 393 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 PEX13Q92968 403 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 DDX60LQ5H9U9 1706 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 A0A1W2PQH9 124 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 IQCF5A8MTL0 148 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 FABP7O15540 132 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 OR5F1O95221 314 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CYP17A1P05093 508 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SRPRAP08240 638 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 NOS3P29474 1203 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CNR2P34972 360 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 OR1G1P47890 313 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 GDI2P50395 445 aaKnown RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CLDN8P56748 225 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 CRB2Q5IJ48 1285 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 LYPLAL1Q5VWZ2 237 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 NADSYN1Q6IA69 706 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 OSTM1Q86WC4 334 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 ENTHD1Q8IYW4 607 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 TMIEQ8NEW7 156 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 OR8K5Q8NH50 307 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RPLP0P6Q8NHW5 317 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 HMGCLL1Q8TB92 370 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SPATA5L1Q9BVQ7 753 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 SGK2Q9HBY8 427 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 RHCGQ9UBD6 479 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 EDARQ9UNE0 448 aa10.91□□□□□ -0.66
CRNKL1-204ENST00000490910 FXYD6-FXYD2A0A087WZ82 144 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 SLC28A2O43868 658 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 AOC2O75106 756 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 BEST1O76090 585 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 PAHP00439 452 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 UBL4AP11441 157 aa10.9□□□□□ -0.66
CRNKL1-204ENST00000490910 ARSBP15848 533 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms