RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 DPEP2Q9H4A9 486 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 LMAN1LQ9HAT1 526 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 RAB9BQ9NP90 201 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 IARS2Q9NSE4 1012 aaKnown RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NDE1Q9NXR1 346 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 EPS15L1Q9UBC2 864 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 POMT2Q9UKY4 750 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 NAP1L2Q9ULW6 460 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 WIPI2Q9Y4P8 454 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 RNF123Q5XPI4 1314 aa4.14□□□□□ -1.75
HMGB1P38-201ENST00000490557 SNED1Q8TER0 1413 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 A0A087WZ39 114 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 E9PQ18 207 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 H3BMM5 538 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 RTCAO00442 366 aaKnown RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 TFECO14948 347 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 PGRMC2O15173 223 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 IDH3BO43837 385 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 CEACAM4O75871 244 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 SIX3O95343 332 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 SLU7O95391 586 aaKnown RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 ZFYP08048 801 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 DESP17661 470 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 HPDP32754 393 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 OR3A3P47888 321 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 MS4A2Q01362 244 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 UBXN1Q04323 297 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 FAM189A2Q15884 450 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 PKN2Q16513 984 aaKnown RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 GPR141Q7Z602 305 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 CCDC185Q8N715 623 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 AGAP4Q96P64 663 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 RBM4BQ9BQ04 359 aaKnown RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 LRRC61Q9BV99 259 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 C3orf14Q9HBI5 128 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 ARMCX3Q9UH62 379 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 ASIC3Q9UHC3 531 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 BAIAP2L1Q9UHR4 511 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 PLCL2Q9UPR0 1127 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 KNSTRNQ9Y448 316 aa4.13□□□□□ -1.75
HMGB1P38-201ENST00000490557 LOC105371242A0A075B767 164 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 MTMR11A4FU01 709 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 YDJCA8MPS7 323 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 MPTX1A8MV57 137 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 IFIT3O14879 490 aaKnown RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 KIF5CO60282 957 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 SAP30O75446 220 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 B3GALNT1O75752 331 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 THEGLP0DJG4 465 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 KRT5P13647 590 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 CD59P13987 128 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 CASTP20810 708 aaKnown RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 DUTP33316 252 aaKnown RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 OR1D5P58170 312 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 CETN1Q12798 172 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 ELAVL2Q12926 359 aaKnown RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 TRA2AQ13595 282 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 PPA1Q15181 289 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 FAM106AQ4KMX7 169 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 DHRS11Q6UWP2 260 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 GTSCR1Q86UQ5 136 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 MEX3DQ86XN8 651 aaKnown RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 OR8H3Q8N146 312 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 NUP93Q8N1F7 819 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 GOT1L1Q8NHS2 421 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 RPLP0P6Q8NHW5 317 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 UBLCP1Q8WVY7 318 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 ATXN7L3BQ96GX2 97 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 TSSK2Q96PF2 358 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 ANP32EQ9BTT0 268 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 UBQLN3Q9H347 655 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 NLGN3Q9NZ94 848 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 MUTYHQ9UIF7 546 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 GTF3C4Q9UKN8 822 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 ZFP37Q9Y6Q3 630 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 HEG1Q9ULI3 1381 aa4.12□□□□□ -1.75
HMGB1P38-201ENST00000490557 hCG_38984A0A1B0GV85 526 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 NKX6-3A6NJ46 265 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 ASB14A6NK59 587 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 TCP10L2B9ZVM9 353 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 KBTBD13C9JR72 458 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 PI4K2BG5E9Z4 385 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 H0Y626 953 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 MPHOSPH10O00566 681 aaKnown RBP4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 SELENOFO60613 162 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 MT-ND3P03897 115 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 RPLP0P05388 317 aaKnown RBP4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 ANKRD34CP0C6C1 535 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 GOT1P17174 413 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 AOC1P19801 751 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 CTNNA2P26232 953 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 GIFP27352 417 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 PIK3R1P27986 724 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 TLX1P31314 330 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 PEX19P40855 299 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 FOLH1Q04609 750 aa4.11□□□□□ -1.75
HMGB1P38-201ENST00000490557 ABRQ12979 859 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms