RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF675Q8TD23 568 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TFGQ92734 400 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ENAMQ9NRM1 1142 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 UPK3BL1B0FP48 263 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 UPK3BL2E5RIL1 263 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 BLOC1S5-TXNDC5H3BN57 136 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 DFNA5O60443 496 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 HSD11B1P28845 292 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 BMP8BP34820 402 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ATP4BP51164 291 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ID2Q02363 134 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 SERINC3Q13530 473 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF630Q2M218 657 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TPRG1Q6ZUI0 275 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TMPRSS9Q7Z410 1059 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 BMP8AQ7Z5Y6 402 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 BORCS6Q96GS4 357 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 FNIP2Q9P278 1114 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 DLGAP4Q9Y2H0 992 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 HSPB11Q9Y547 144 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 C13orf42A0A1B0GVH6 325 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF878C9JN71 531 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 VAMP1P23763 118 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 STT3AP46977 705 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 GPRC6AQ5T6X5 926 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 NCEH1Q6PIU2 408 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 TREM1Q9NP99 234 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ABCG2Q9UNQ0 655 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 HCN4Q9Y3Q4 1203 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF451Q9Y4E5 1061 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 VILLO15195 856 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 PEPDP12955 493 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF648Q5T619 568 aaPredicted RBP17.04■□□□□ 0.32
NPHP4-209ENST00000489180 ADGRD2Q7Z7M1 963 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 WFIKKN2Q8TEU8 576 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 SEC61A2Q9H9S3 476 aa17.04■□□□□ 0.32
NPHP4-209ENST00000489180 KCNE1P15382 129 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 CD1DP15813 335 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 APLP1P51693 650 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 TUBA3CQ13748 450 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 UAP1L1Q3KQV9 507 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 CMTR2Q8IYT2 770 aaKnown RBP17.03■□□□□ 0.32
NPHP4-209ENST00000489180 C7orf61Q8IZ16 206 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 CD180Q99467 661 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 RNF121Q9H920 327 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 MKLN1Q9UL63 735 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF670-ZNF695F2Z2N8 137 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 GRSF1Q12849 480 aaKnown RBP eCLIP17.03■□□□□ 0.32
NPHP4-209ENST00000489180 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
NPHP4-209ENST00000489180 BTBD16Q32M84 506 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 RAB12Q6IQ22 244 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 OR5M3Q8NGP4 307 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 SLC22A18Q96BI1 424 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 TXNRD2Q9NNW7 524 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 A0A0U1RQF3 1178 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 ST3GAL4Q11206 333 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 ZC3H3Q8IXZ2 948 aaKnown RBP17.03■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF527Q8NB42 609 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 HMGB4Q8WW32 186 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
NPHP4-209ENST00000489180 SLAIN1Q8ND83 568 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 CCDC54Q8NEL0 328 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 GAL3ST3Q96A11 431 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 ALG5Q9Y673 324 aa17.03■□□□□ 0.32
NPHP4-209ENST00000489180 PDYNP01213 254 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 ALPPL2P10696 532 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 PLCZ1Q86YW0 608 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 PHC2Q8IXK0 858 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 OR8S1Q8NH09 359 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 HDAC2Q92769 488 aaKnown RBP17.02■□□□□ 0.32
NPHP4-209ENST00000489180 TMEM9Q9P0T7 183 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 HCN3Q9P1Z3 774 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 RASAL1O95294 804 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 AGR2O95994 175 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 NPPAP01160 153 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 OR2L8Q8NGY9 312 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 ZNF726A6NNF4 738 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 LHCGRP22888 699 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 ATP5A1P25705 553 aaKnown RBP17.02■□□□□ 0.32
NPHP4-209ENST00000489180 RBM34P42696 430 aaKnown RBP17.02■□□□□ 0.32
NPHP4-209ENST00000489180 PON3Q15166 354 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 TECRLQ5HYJ1 363 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 C22orf39Q6P5X5 142 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 NATD1Q8N6N6 113 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 OR8K3Q8NH51 312 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 NPLOC4Q8TAT6 608 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 NUDT15Q9NV35 164 aa17.02■□□□□ 0.32
NPHP4-209ENST00000489180 KMOO15229 486 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 B4GALT2O60909 372 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 BEST1O76090 585 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 ZNF806P0C7X5 589 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 RPA4Q13156 261 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 CEACAM7Q14002 265 aa17.02■□□□□ 0.31
NPHP4-209ENST00000489180 OGFRL1Q5TC84 451 aaPredicted RBP17.02■□□□□ 0.31
NPHP4-209ENST00000489180 WDTC1Q8N5D0 677 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms