RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 OGFRL1Q5TC84 451 aaPredicted RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 FUNDC1Q8IVP5 155 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 PQLC1Q8N2U9 271 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 C19orf47Q8N9M1 422 aaKnown RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 CD244Q9BZW8 370 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 PCBD2Q9H0N5 130 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 MRPS30Q9NP92 439 aaKnown RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 CUEDC1Q9NWM3 386 aaPredicted RBP18.52■□□□□ 0.56
CCM2-216ENST00000488727 KLK13Q9UKR3 277 aa18.52■□□□□ 0.56
CCM2-216ENST00000488727 CACNA1AO00555 2505 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 STK16O75716 305 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 FKBP9O95302 570 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 UROSP10746 265 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 SPINK2P20155 84 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 CMPK1P30085 196 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 TRAP1Q12931 704 aaKnown RBP18.52■□□□□ 0.55
CCM2-216ENST00000488727 KCNAB1Q14722 419 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 XKR7Q5GH72 579 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 COQ5Q5HYK3 327 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 FCRL6Q6DN72 434 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 SPATA19Q7Z5L4 167 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 DDIASQ8IXT1 998 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 MIER2Q8N344 545 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 KCNA7Q96RP8 456 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 ZNF382Q96SR6 550 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 CCT7Q99832 543 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 DPH7Q9BTV6 452 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 STRADBQ9C0K7 418 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 FAM60AQ9NP50 221 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 SPAG4Q9NPE6 437 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 SEMA4BQ9NPR2 832 aaPredicted RBP18.52■□□□□ 0.55
CCM2-216ENST00000488727 PFDN4Q9NQP4 134 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 SDR39U1Q9NRG7 319 aaPredicted RBP18.52■□□□□ 0.55
CCM2-216ENST00000488727 OCIAD1Q9NX40 245 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 BTRCQ9Y297 605 aa18.52■□□□□ 0.55
CCM2-216ENST00000488727 WDFY3Q8IZQ1 3526 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 TMX2-CTNND1H3BSU7 103 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 E2F3O00716 465 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 HGFP14210 728 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 CSTF2P33240 577 aaKnown RBP eCLIP18.51■□□□□ 0.553e-8■■■■■ 39.8
CCM2-216ENST00000488727 HSD11B2P80365 405 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 PCBP2Q15366 365 aaKnown RBP eCLIP18.51■□□□□ 0.558e-6■■■■□ 24
CCM2-216ENST00000488727 FAM219BQ5XKK7 198 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 PAOXQ6QHF9 649 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 SYVN1Q86TM6 617 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 KMT5CQ86Y97 462 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 APLFQ8IW19 511 aaPredicted RBP18.51■□□□□ 0.55
CCM2-216ENST00000488727 PCYOX1LQ8NBM8 494 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 AGBL5Q8NDL9 886 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 BHLHE22Q8NFJ8 381 aaPredicted RBP18.51■□□□□ 0.55
CCM2-216ENST00000488727 TSPEARQ8WU66 669 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 GATA6Q92908 595 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 NEIL2Q969S2 332 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 SOHLH2Q9NX45 425 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 TMEM181Q9P2C4 612 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 CROTQ9UKG9 612 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 NDUFAF1Q9Y375 327 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 KLK4Q9Y5K2 254 aa18.51■□□□□ 0.55
CCM2-216ENST00000488727 CCDC187A0A096LP49 1063 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 A0A1B0GTL3 188 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 PRSS51A0A1B0GVH4 220 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 CRCPO75575 148 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 CHEK2O96017 543 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 CCL4P13236 92 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 IDO1P14902 403 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 PEX2P28328 305 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 ABATP80404 500 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 TRIM25Q14258 630 aaKnown RBP18.5■□□□□ 0.55
CCM2-216ENST00000488727 TRIP10Q15642 601 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 FIGLAQ6QHK4 219 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 C17orf64Q86WR6 236 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 D2HGDHQ8N465 521 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 OR9I1Q8NGQ6 314 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 TUBGCP3Q96CW5 907 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 CMKLR1Q99788 373 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 HAUS8Q9BT25 410 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 SCNM1Q9BWG6 230 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 SIDT1Q9NXL6 827 aaKnown RBP18.5■□□□□ 0.55
CCM2-216ENST00000488727 ADA2Q9NZK5 511 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 CD300AQ9UGN4 299 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 ZNF225Q9UK10 706 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 LOXL2Q9Y4K0 774 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 PTGDR2Q9Y5Y4 395 aa18.5■□□□□ 0.55
CCM2-216ENST00000488727 MDC1Q14676 2089 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 MAGEA13PA6NCF6 341 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 HCRTR1O43613 425 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 CCNDBP1O95273 360 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 C8BP07358 591 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 ADRB1P08588 477 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 EBLN1P0CF75 366 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 FOLR1P15328 257 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 EPORP19235 508 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 ITIH1P19827 911 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 MRPS22P82650 360 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 CAMK2BQ13554 666 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 C3orf38Q5JPI3 329 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 SAMD4BQ5PRF9 694 aaKnown RBP18.49■□□□□ 0.55
CCM2-216ENST00000488727 LPCAT4Q643R3 524 aa18.49■□□□□ 0.55
CCM2-216ENST00000488727 ZNF425Q6IV72 752 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms