RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PGM2Q96G03 612 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 FAM84BQ96KN1 310 aaPredicted RBP3.32□□□□□ -1.88
HFM1-208ENST00000488023 QTRT1Q9BXR0 403 aaKnown RBP3.32□□□□□ -1.88
HFM1-208ENST00000488023 VN1R1Q9GZP7 353 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 METTL7AQ9H8H3 244 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 TMEM184CQ9NVA4 438 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 MSRB1Q9NZV6 116 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 PCSK1NQ9UHG2 260 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 NARFQ9UHQ1 456 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 YIPF1Q9Y548 306 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 NPC1L1Q9UHC9 1359 aa3.32□□□□□ -1.88
HFM1-208ENST00000488023 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 hDV102S1A0JD36 115 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 NCF1BA6NI72 391 aaPredicted RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 NCF1CA8MVU1 366 aaPredicted RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 E5RGE8 158 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CHUKO15111 745 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 ITM2AO43736 263 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 NME2P1O60361 137 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 B4GALT2O60909 372 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 KIAA0754O94854 1291 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 KRT19P08727 400 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 UQCRFS1P1P0C7P4 283 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 RALAP11233 206 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 EZRP15311 586 aaKnown RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 TNNI3P19429 210 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 GALP22466 123 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CBLP22681 906 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 GNLYP22749 145 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 ALDH4A1P30038 563 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 MNDAP41218 407 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 NR2C2P49116 596 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 PRRX1P54821 245 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 VCPP55072 806 aaKnown RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 SSTP61278 116 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 KIF19Q2TAC6 998 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 ZC2HC1CQ53FD0 456 aaPredicted RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 KLHL22Q53GT1 634 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 SPDYCQ5MJ68 293 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 RABGAP1LQ5R372 815 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 NKAIN2Q5VXU1 208 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 MIS18BP1Q6P0N0 1132 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CLEC2AQ6UVW9 174 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CD164L2Q6UWJ8 174 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 FAM159AQ6UWV7 190 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 Q6ZSV7 163 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 ZDHHC17Q8IUH5 632 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 TMEM139Q8IV31 216 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 LGI2Q8N0V4 545 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CRYBG2Q8N1P7 616 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 LMNTD1Q8N9Z9 388 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 TRPV3Q8NET8 790 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CCDC148Q8NFR7 591 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 OSTF1Q92882 214 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 MARK4Q96L34 752 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 GPR137Q96N19 417 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 CSF3RQ99062 836 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 GPA33Q99795 319 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 MRPL13Q9BYD1 178 aaKnown RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 LRMDAQ9H2I8 198 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 WDR76Q9H967 626 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 UPF2Q9HAU5 1272 aaKnown RBP3.31□□□□□ -1.88
HFM1-208ENST00000488023 HYPKQ9NX55 129 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 NSG2Q9Y328 171 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 SF3B1O75533 1304 aaKnown RBP eCLIP3.31□□□□□ -1.883e-6■■■■■ 135.2
HFM1-208ENST00000488023 PTCH1Q13635 1447 aa3.31□□□□□ -1.88
HFM1-208ENST00000488023 TEX13DA0A0J9YY54 714 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 SMIM35A0A1B0GVV1 85 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GOLGA8OA6NCC3 632 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ANTXRLA6NF34 631 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ZNF716A6NP11 495 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 GOLGA8NF8WBI6 632 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 NPIPA3F8WFD2 350 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 LGALS8O00214 317 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 SNNO75324 88 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 BBOX1O75936 387 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 TM7SF2O76062 418 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 RHOBTB1O94844 696 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 PIGNO95427 931 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SYNGR4O95473 234 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 BAG3O95817 575 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 LDLRP01130 860 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 FGF4P08620 206 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ZNF735P0CB33 412 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 F3P13726 295 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CYP3A5P20815 502 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 RPL3P39023 403 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 MYBPC1Q00872 1141 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 SLC3A1Q07837 685 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 DMTNQ08495 405 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 DMP1Q13316 513 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 KLF9Q13886 244 aaPredicted RBP3.3□□□□□ -1.88
HFM1-208ENST00000488023 IDI1Q13907 227 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 HNF4GQ14541 408 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 CCDC57Q2TAC2 916 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 AGKQ53H12 422 aa3.3□□□□□ -1.88
HFM1-208ENST00000488023 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms