RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 LURAP1Q96LR2 239 aa2.84□□□□□ -1.95
CCDC66-221ENST00000487739 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
CCDC66-221ENST00000487739 TEX13BQ9BXU2 312 aa2.84□□□□□ -1.95
CCDC66-221ENST00000487739 TMX4Q9H1E5 349 aaPredicted RBP2.84□□□□□ -1.95
CCDC66-221ENST00000487739 GPR34Q9UPC5 381 aa2.84□□□□□ -1.95
CCDC66-221ENST00000487739 COLEC10Q9Y6Z7 277 aa2.84□□□□□ -1.95
CCDC66-221ENST00000487739 FAM205AQ6ZU69 1335 aa2.84□□□□□ -1.96
CCDC66-221ENST00000487739 POGZQ7Z3K3 1410 aa2.84□□□□□ -1.96
CCDC66-221ENST00000487739 KRT6AP02538 564 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 KRT6BP04259 564 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 SUPT20HL2P0C7V6 817 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 AZGP1P25311 298 aaKnown RBP2.83□□□□□ -1.96
CCDC66-221ENST00000487739 FCGR2BP31994 310 aaPredicted RBP2.83□□□□□ -1.96
CCDC66-221ENST00000487739 FCGR2CP31995 323 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 HSD17B3P37058 310 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 KRT6CP48668 564 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 CRYBA2P53672 197 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 CSE1LP55060 971 aaKnown RBP2.83□□□□□ -1.96
CCDC66-221ENST00000487739 CLDN17P56750 224 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
CCDC66-221ENST00000487739 SPANXN4Q5MJ08 99 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 WDR78Q5VTH9 848 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 KRT39Q6A163 491 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 NAA16Q6N069 864 aaPredicted RBP2.83□□□□□ -1.96
CCDC66-221ENST00000487739 TLK2Q86UE8 772 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 VASH2Q86V25 355 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 CCDC63Q8NA47 563 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 NABP1Q96AH0 204 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 PYCR2Q96C36 320 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 MXD3Q9BW11 206 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 PDFQ9HBH1 243 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 EXOC1Q9NV70 894 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 PKD2L2Q9NZM6 624 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 SNX8Q9Y5X2 465 aa2.83□□□□□ -1.96
CCDC66-221ENST00000487739 CDX4O14627 284 aaPredicted RBP2.82□□□□□ -1.96
CCDC66-221ENST00000487739 ADAM20O43506 726 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 PGM3O95394 542 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 QDPRP09417 244 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 CD1DP15813 335 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 SLC1A4P43007 532 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 UBASH3AP57075 661 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 RALGDSQ12967 914 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 SNTB1Q13884 538 aaKnown RBP2.82□□□□□ -1.96
CCDC66-221ENST00000487739 MARC1Q5VT66 337 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 TTC27Q6P3X3 843 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 MACC1Q6ZN28 852 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 MCM10Q7L590 875 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 IQCHQ86VS3 1027 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 DND1Q8IYX4 353 aaKnown RBP2.82□□□□□ -1.96
CCDC66-221ENST00000487739 PHYHIPLQ96FC7 376 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 LRRC3BQ96PB8 259 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 APOL6Q9BWW8 343 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 XAB2Q9HCS7 855 aaKnown RBP2.82□□□□□ -1.96
CCDC66-221ENST00000487739 CUTCQ9NTM9 273 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 SLC12A6Q9UHW9 1150 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 SLC6A5Q9Y345 797 aa2.82□□□□□ -1.96
CCDC66-221ENST00000487739 MAGED1Q9Y5V3 778 aaPredicted RBP2.82□□□□□ -1.96
CCDC66-221ENST00000487739 AHCYL1O43865 530 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 VENTXO95231 258 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 ACTN2P35609 894 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 ACSM1Q08AH1 577 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 ALCAMQ13740 583 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 KNOP1Q1ED39 458 aaKnown RBP2.81□□□□□ -1.96
CCDC66-221ENST00000487739 POM121L1PQ3SYA9 428 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 LACTB2Q53H82 288 aaPredicted RBP2.81□□□□□ -1.96
CCDC66-221ENST00000487739 C2orf83Q53S99 150 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 ZRANB3Q5FWF4 1079 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 NHLRC3Q5JS37 347 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 CFAP161Q6P656 301 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 TMED8Q6PL24 325 aaPredicted RBP2.81□□□□□ -1.96
CCDC66-221ENST00000487739 AMIGO1Q86WK6 493 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 PRSS35Q8N3Z0 413 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 CCDC185Q8N715 623 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 SP140LQ9H930 580 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 KCNK13Q9HB14 408 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 C3orf14Q9HBI5 128 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 NSMCE4AQ9NXX6 385 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 TRPV2Q9Y5S1 764 aa2.81□□□□□ -1.96
CCDC66-221ENST00000487739 COL4A4P53420 1690 aaPredicted RBP2.81□□□□□ -1.96
CCDC66-221ENST00000487739 RALGAPA1Q6GYQ0 2036 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 TRBC2A0A5B9 178 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 TCP10L2B9ZVM9 353 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 SIGLEC5O15389 551 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 CELF2O95319 508 aaKnown RBP2.8□□□□□ -1.96
CCDC66-221ENST00000487739 STAG3L1P0CL83 205 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 EPORP19235 508 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 NNMTP40261 264 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 CASP2P42575 452 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 RBPJQ06330 500 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 ITPK1Q13572 414 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 CYLC2Q14093 348 aaPredicted RBP2.8□□□□□ -1.96
CCDC66-221ENST00000487739 TIMM50Q3ZCQ8 353 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 TTC31Q49AM3 519 aaPredicted RBP2.8□□□□□ -1.96
CCDC66-221ENST00000487739 BMP2KLQ5H9B9 411 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 MUC21Q5SSG8 566 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 ARMC4Q5T2S8 1044 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 KHDRBS2Q5VWX1 349 aaKnown RBP2.8□□□□□ -1.96
CCDC66-221ENST00000487739 SPATA1Q5VX52 437 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 ANKRD13CQ8N6S4 541 aa2.8□□□□□ -1.96
CCDC66-221ENST00000487739 SECISBP2LQ93073 1101 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms