RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MTMR12Q9C0I1 747 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 IARS2Q9NSE4 1012 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 TMEM161AQ9NX61 479 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 GPR132Q9UNW8 380 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 KCNJ14Q9UNX9 436 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 PA2G4Q9UQ80 394 aaKnown RBP4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 SPATA31E1Q6ZUB1 1445 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 ATP10DQ9P241 1426 aa4.46□□□□□ -1.7
PRPF38A-203ENST00000487160 ADGRB1O14514 1584 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 DHX57Q6P158 1386 aaKnown RBP4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 ANKRD30BQ9BXX2 1392 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 TRBV5-5A0A0J9YX44 114 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 A0A1W2PRV1 198 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 ILVBLA1L0T0 632 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 EDN1P05305 212 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 SP9P0CG40 484 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 DLATP10515 647 aaKnown RBP4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 UROSP10746 265 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 PIK3R1P27986 724 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 NME5P56597 212 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 KIAA1644Q3SXP7 199 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC39A12Q504Y0 691 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 XKR6Q5GH73 641 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 LCN1P1Q5VSP4 162 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 FUT10Q6P4F1 479 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 CEACAM20Q6UY09 585 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 RAPH1Q70E73 1250 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 CCDC83Q8IWF9 413 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 KIRREL3Q8IZU9 778 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 SPC24Q8NBT2 197 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 KIAA0895Q8NCT3 520 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 OR10V1Q8NGI7 309 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 METTL21AQ8WXB1 218 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 PIK3R3Q92569 461 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF524Q96C55 264 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 SNRNP40Q96DI7 357 aaKnown RBP4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 CABS1Q96KC9 395 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 C4orf45Q96LM5 186 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 CCDC43Q96MW1 224 aaKnown RBP4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 PRAM1Q96QH2 718 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 NODALQ96S42 347 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 PIGQQ9BRB3 760 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 ATG101Q9BSB4 218 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC5A7Q9GZV3 580 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF624Q9P2J8 865 aaPredicted RBP4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 PCDHGA1Q9Y5H4 931 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 CRB1P82279 1406 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 IL16Q14005 1332 aa4.45□□□□□ -1.7
PRPF38A-203ENST00000487160 LY75O60449 1722 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 TRAV18A0A075B6X5 111 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 A0A0A6YYC8 382 aaPredicted RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 SNURFLB1AK76 121 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 C2CD4DB7Z1M9 353 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 I3L1I5 382 aaPredicted RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 TTI1O43156 1089 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 KINO60870 393 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 CRCPO75575 148 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 C8orf89P0DMQ9 161 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 ERVK-10P10266 1014 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 CYP2A7P20853 494 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 CETN2P41208 172 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 GLIPR1P48060 266 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 KHKP50053 298 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 ADARP55265 1226 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 RBM39Q14498 530 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 SLC15A2Q16348 729 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 EXT1Q16394 746 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 PDLIM3Q53GG5 364 aaPredicted RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 ZNF789Q5FWF6 425 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 ARHGEF16Q5VV41 709 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 SH2D5Q6ZV89 423 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 G2E3Q7L622 706 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 AQP12AQ8IXF9 295 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 RCOR2Q8IZ40 523 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 LRTM2Q8N967 370 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 RBM41Q96IZ5 413 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 INPP4AQ96PE3 977 aaPredicted RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 CDCA3Q99618 268 aaPredicted RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 RNF121Q9H920 327 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 RAVER2Q9HCJ3 691 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 NOCTQ9UK39 431 aaKnown RBP4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 GRID1Q9ULK0 1009 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 QRICH2Q9H0J4 1663 aa4.44□□□□□ -1.7
PRPF38A-203ENST00000487160 DOT1LQ8TEK3 1739 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 TRPM1Q7Z4N2 1603 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CPDO75976 1380 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 EIF3AQ14152 1382 aaKnown RBP4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 LTN1O94822 1766 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 A0A0B4J203 849 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 A0A0G2JLW4 131 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 NPIPA3F8WFD2 350 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 EPHB6O15197 1021 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 GLRA3O75311 464 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 RAD51DO75771 328 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
PRPF38A-203ENST00000487160 GPIP06744 558 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms