RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 WDR37Q9Y2I8 494 aa4.02□□□□□ -1.77
SMC4-218ENST00000486711 A0A087WW49 117 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 A0A087X0K7 114 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 A0A0A6YYC8 382 aaPredicted RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 TRBV4-1A0A0J9YWV2 114 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 MAGEB16A2A368 324 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ANKDD1BA6NHY2 528 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 HHLA1C9JL84 531 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 I3L1I5 382 aaPredicted RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 M0R296 226 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 KIF5CO60282 957 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ACSL4O60488 711 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 CYTIPO60759 359 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 GAS8O95995 478 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 AMBPP02760 352 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 VTNP04004 478 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 CD48P09326 243 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 P4HA1P13674 534 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 AADACP22760 399 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 NT5C2P49902 561 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 SNRPD1P62314 119 aaKnown RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 SP3Q02447 781 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 LCP2Q13094 533 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 TMEM132DQ14C87 1099 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 SGCBQ16585 318 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ZNF876PQ49A33 203 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 KCTD11Q693B1 232 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 OR4C11Q6IEV9 310 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 FAM53AQ6NSI3 398 aaPredicted RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 SLC25A47Q6Q0C1 308 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 DHRS11Q6UWP2 260 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 LEKR1Q6ZMV7 388 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 COX8CQ7Z4L0 72 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 TMEM126BQ8IUX1 230 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 LACC1Q8IV20 430 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 PEX5LQ8IYB4 626 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 TMEM99Q8N816 258 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 TRIM58Q8NG06 486 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ZNRF4Q8WWF5 429 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 BCL2L2Q92843 193 aaPredicted RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 EEF2KMTQ96G04 330 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 GAL3ST4Q96RP7 486 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 TDRD1Q9BXT4 1180 aaKnown RBP4.01□□□□□ -1.77
SMC4-218ENST00000486711 EGLN1Q9GZT9 426 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 C5orf66Q9H5L9 145 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ZNF696Q9H7X3 374 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 MAN2C1Q9NTJ4 1040 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 C2orf42Q9NWW7 574 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 MAD2L2Q9UI95 211 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 ZNF510Q9Y2H8 683 aa4.01□□□□□ -1.77
SMC4-218ENST00000486711 MSGN1A6NI15 193 aa4□□□□□ -1.77
SMC4-218ENST00000486711 SLC1A7O00341 560 aa4□□□□□ -1.77
SMC4-218ENST00000486711 CLN5O75503 358 aa4□□□□□ -1.77
SMC4-218ENST00000486711 PATE4P0C8F1 98 aa4□□□□□ -1.77
SMC4-218ENST00000486711 CEACAM1P13688 526 aa4□□□□□ -1.77
SMC4-218ENST00000486711 SLC1A3P43003 542 aa4□□□□□ -1.77
SMC4-218ENST00000486711 FKBP1BP68106 108 aa4□□□□□ -1.77
SMC4-218ENST00000486711 ITGA9Q13797 1035 aa4□□□□□ -1.77
SMC4-218ENST00000486711 STXBP2Q15833 593 aa4□□□□□ -1.77
SMC4-218ENST00000486711 SGSM1Q2NKQ1 1148 aa4□□□□□ -1.77
SMC4-218ENST00000486711 ETFRF1Q6IPR1 90 aa4□□□□□ -1.77
SMC4-218ENST00000486711 ALKBH5Q6P6C2 394 aaKnown RBP4□□□□□ -1.77
SMC4-218ENST00000486711 SIGLEC15Q6ZMC9 328 aa4□□□□□ -1.77
SMC4-218ENST00000486711 C15orf52Q6ZUT6 534 aaKnown RBP4□□□□□ -1.77
SMC4-218ENST00000486711 TOM1L2Q6ZVM7 507 aa4□□□□□ -1.77
SMC4-218ENST00000486711 PRSS42Q7Z5A4 293 aa4□□□□□ -1.77
SMC4-218ENST00000486711 HOGA1Q86XE5 327 aa4□□□□□ -1.77
SMC4-218ENST00000486711 THEM5Q8N1Q8 247 aa4□□□□□ -1.77
SMC4-218ENST00000486711 CHCHD4Q8N4Q1 142 aa4□□□□□ -1.77
SMC4-218ENST00000486711 CCDC185Q8N715 623 aa4□□□□□ -1.77
SMC4-218ENST00000486711 RNF149Q8NC42 400 aa4□□□□□ -1.77
SMC4-218ENST00000486711 ZNF485Q8NCK3 441 aa4□□□□□ -1.77
SMC4-218ENST00000486711 DDHD1Q8NEL9 900 aa4□□□□□ -1.77
SMC4-218ENST00000486711 OR5T2Q8NGG2 359 aa4□□□□□ -1.77
SMC4-218ENST00000486711 OR6S1Q8NH40 331 aa4□□□□□ -1.77
SMC4-218ENST00000486711 MAPK15Q8TD08 544 aa4□□□□□ -1.77
SMC4-218ENST00000486711 MRGPRDQ8TDS7 321 aa4□□□□□ -1.77
SMC4-218ENST00000486711 ULK4Q96C45 1275 aa4□□□□□ -1.77
SMC4-218ENST00000486711 NXPE2Q96DL1 559 aa4□□□□□ -1.77
SMC4-218ENST00000486711 IL12RB2Q99665 862 aa4□□□□□ -1.77
SMC4-218ENST00000486711 PI4K2AQ9BTU6 479 aa4□□□□□ -1.77
SMC4-218ENST00000486711 RBM4Q9BWF3 364 aaKnown RBP4□□□□□ -1.77
SMC4-218ENST00000486711 GFRA4Q9GZZ7 299 aa4□□□□□ -1.77
SMC4-218ENST00000486711 THAP9Q9H5L6 903 aa4□□□□□ -1.77
SMC4-218ENST00000486711 MRPL17Q9NRX2 175 aaKnown RBP4□□□□□ -1.77
SMC4-218ENST00000486711 RNF186Q9NXI6 227 aa4□□□□□ -1.77
SMC4-218ENST00000486711 AKAP7Q9P0M2 348 aaPredicted RBP4□□□□□ -1.77
SMC4-218ENST00000486711 SATB2Q9UPW6 733 aa4□□□□□ -1.77
SMC4-218ENST00000486711 SYCE3A1L190 88 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 CCDC162PA2VCL2 907 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 KHDRBS3O75525 346 aaKnown RBP3.99□□□□□ -1.77
SMC4-218ENST00000486711 PRDM1O75626 825 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 MT-ND2P03891 347 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 MT-ND3P03897 115 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 GNB3P16520 340 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 FERP16591 822 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 CTNNA2P26232 953 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 SRD5A2P31213 254 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 OR3A2P47893 321 aa3.99□□□□□ -1.77
SMC4-218ENST00000486711 PAX9P55771 341 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms