RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 MED26O95402 600 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 MSL3P1P0C860 447 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 DRD4P21917 467 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 MC2RQ01718 297 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 ACY1Q03154 408 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 C19orf57Q0VDD7 668 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 SF3A3Q12874 501 aaKnown RBP eCLIP12.17□□□□□ -0.465e-7■■■□□ 17.5
HDAC6-229ENST00000486665 PRTGQ2VWP7 1150 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 TBC1D25Q3MII6 688 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 VWA5B1Q5TIE3 1220 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 PRAMEF17Q5VTA0 474 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 Q6ZSR9 355 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 TRIM46Q7Z4K8 759 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 DDIASQ8IXT1 998 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 CACTIN-AS1Q8N1I8 211 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 CSNK1A1LQ8N752 337 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 KCT2Q8NC54 265 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 TRPV3Q8NET8 790 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 TTLQ8NG68 377 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 OR2T11Q8NH01 316 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 RFWD2Q8NHY2 731 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 RERGQ96A58 199 aaPredicted RBP12.17□□□□□ -0.46
HDAC6-229ENST00000486665 RNF31Q96EP0 1072 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 CHMP6Q96FZ7 201 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
HDAC6-229ENST00000486665 FAR2Q96K12 515 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 PPP1R36Q96LQ0 422 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 OR6C1Q96RD1 312 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 MS4A8Q9BY19 250 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 ACPTQ9BZG2 426 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 STRADBQ9C0K7 418 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 APMAPQ9HDC9 416 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 FGF21Q9NSA1 209 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 PSD3Q9NYI0 1048 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 ADGRE2Q9UHX3 823 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 LOXL2Q9Y4K0 774 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 USH1CQ9Y6N9 552 aa12.17□□□□□ -0.46
HDAC6-229ENST00000486665 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 C4orf51C9J302 202 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 HDAC3O15379 428 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 RRP8O43159 456 aaKnown RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CHEK2O96017 543 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 B3GALT4O96024 378 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SERPINA6P08185 405 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 PLA2G2AP14555 144 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 ITIH1P19827 911 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 PTX3P26022 381 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 GSTM2P28161 218 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SERPINB1P30740 379 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 HNRNPH1P31943 449 aaKnown RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 ETV5P41161 510 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CXADRP78310 365 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 FOXM1Q08050 763 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 TUBB3Q13509 450 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 PWP1Q13610 501 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 TOR1AIP1Q5JTV8 583 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 DEPDC1Q5TB30 811 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 RNF165Q6ZSG1 346 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 RAB11FIP2Q7L804 512 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CAMKVQ8NCB2 501 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CMTM7Q96FZ5 175 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SEC16BQ96JE7 1060 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CMKLR1Q99788 373 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CTRCQ99895 268 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 RABEP2Q9H5N1 569 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 ENAMQ9NRM1 1142 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 VTI1BQ9UEU0 232 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 GIMAP2Q9UG22 337 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 SERTAD3Q9UJW9 196 aa12.16□□□□□ -0.46
HDAC6-229ENST00000486665 RUVBL1Q9Y265 456 aaKnown RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 MRPS2Q9Y399 296 aaKnown RBP12.16□□□□□ -0.46
HDAC6-229ENST00000486665 CCDC187A0A096LP49 1063 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ATP6AP2A0A1C7CYW4 349 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 FITM1A5D6W6 292 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 B4E171 279 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SLCO1B7G3V0H7 640 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SLC28A1O00337 649 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SDHDO14521 159 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SHOX2O60902 331 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ATP6AP2O75787 350 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 OR2B3O76000 313 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TIAF1O95411 115 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TGDSO95455 350 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 SMIM10L1P0DMW3 83 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 FGF5P12034 268 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 ALOX15P16050 662 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-229ENST00000486665 TSPAN7P41732 249 aa12.15□□□□□ -0.46
HDAC6-229ENST00000486665 AQP5P55064 265 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms