RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FARSAQ9Y285 508 aaKnown RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 TSC22D4Q9Y3Q8 395 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 SYNDIG1LA6NDD5 238 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF891A8MT65 544 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 G3V2L1 256 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 PSMD12O00232 456 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 FOXE1O00358 373 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 LCMT2O60294 686 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 NPHS1O60500 1241 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ULK1O75385 1050 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ESRRBO95718 433 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 DLGAP3O95886 979 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 RPS17P08708 135 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ALOX12P18054 663 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 FBLP22087 321 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 VARSP26640 1264 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 PTPN4P29074 926 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 HMOX2P30519 316 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 DLSTP36957 453 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 STAT5AP42229 794 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TSFMP43897 325 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 GABRA4P48169 554 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 RAP1GDS1P52306 607 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 MAGOHP61326 146 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 YBX1P67809 324 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 MEF2AQ02078 507 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 RHDQ02161 417 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 E2F2Q14209 437 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 AP5B1Q2VPB7 878 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 GGTA1PQ4G0N0 100 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 FBXO48Q5FWF7 155 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 MLIPQ5VWP3 458 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM214Q6NUQ4 689 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 CCDC81Q6ZN84 652 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 OVCH1Q7RTY7 1134 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 DTX1Q86Y01 620 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 PLD3Q8IV08 490 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 C10orf107Q8IVU9 208 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 SPNS2Q8IVW8 549 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 LAS2Q8IYD9 372 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 GBP7Q8N8V2 638 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 OR7G3Q8NG95 312 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 METTL6Q8TCB7 284 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TRPC4APQ8TEL6 797 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 RGMAQ96B86 450 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TM4SF19Q96DZ7 209 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 MMABQ96EY8 250 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 QRFPRQ96P65 431 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 IP6K3Q96PC2 410 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 GBP5Q96PP8 586 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM237Q96Q45 408 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 SERPINI1Q99574 410 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 CCT7Q99832 543 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 PAIP2Q9BPZ3 127 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TBCDQ9BTW9 1192 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 NPLQ9BXD5 320 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 SPRY4Q9C004 299 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 REXO4Q9GZR2 422 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 WDR54Q9H977 334 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 COPS7BQ9H9Q2 264 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 MKKSQ9NPJ1 570 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 STARD5Q9NSY2 213 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 C14orf105Q9NVL8 296 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF282Q9UDV7 671 aaPredicted RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 TRPS1Q9UHF7 1281 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 EMCNQ9ULC0 261 aa7.87□□□□□ -1.15
SF3A1-208ENST00000485618 RUVBL1Q9Y265 456 aaKnown RBP7.87□□□□□ -1.15
SF3A1-208ENST00000485618 ARHGAP10A1A4S6 786 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 BLACEA4D250 179 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PMS2P1A4D2B8 440 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 LRIT2A6NDA9 550 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 FOXO6A8MYZ6 492 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 H3BMH7 237 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 PEX12O00623 359 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 OR7A17O14581 309 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 B3GALT2O43825 422 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 TYROBPO43914 113 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 GUCY1B2O75343 617 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 NSA2O95478 260 aaKnown RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ONECUT2O95948 504 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 BPGMP07738 259 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CYC1P08574 325 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SPTBP11277 2137 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 HSD3B1P14060 373 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF28P17035 718 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 HSD3B2P26439 372 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 ALDH3A1P30838 453 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 TLX1P31314 330 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 RORAP35398 523 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 SERPINB4P48594 390 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CDH13P55290 713 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CYP4F2P78329 520 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 GALNT1Q10472 559 aaPredicted RBP7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CLN3Q13286 438 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 DNASE1L3Q13609 305 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 CUL3Q13618 768 aa7.86□□□□□ -1.15
SF3A1-208ENST00000485618 DDX39BQ13838 428 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms