RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 EHD1Q9H4M9 534 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 SOX17Q9H6I2 414 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 ZNF395Q9H8N7 513 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 SENP1Q9P0U3 644 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 IFT80Q9P2H3 777 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 SRPK3Q9UPE1 567 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 NAALAD2Q9Y3Q0 740 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 SMG1Q96Q15 3661 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 MAGEB17A8MXT2 336 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 DSCR3O14972 297 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 RRP8O43159 456 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 ERI3O43414 337 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 CAPN1P07384 714 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 CD82P27701 267 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 HTR6P50406 440 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 DCDP81605 110 aaKnown RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 VWA2Q5GFL6 755 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 CFAP157Q5JU67 520 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ZNF517Q6ZMY9 492 aaPredicted RBP11.28□□□□□ -0.6
APTX-227ENST00000485479 AMER3Q8N944 861 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 TLCD1Q96CP7 247 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 C17orf62Q9BQA9 187 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 SARGQ9BW04 601 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 C1QTNF3Q9BXJ4 246 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 ACTL8Q9H568 366 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 MID1IP1Q9NPA3 183 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
APTX-227ENST00000485479 TMEM233B4DJY2 109 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 MASP2O00187 686 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 NKX2-8O15522 239 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 CXCR2P25025 360 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 SERPINB3P29508 390 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 AHRP35869 848 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 ARSFP54793 590 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 RPS13P62277 151 aaKnown RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 RELAQ04206 551 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 DNASE1L3Q13609 305 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 IL10RAQ13651 578 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 ERV3-1Q14264 604 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TBCCQ15814 346 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 FAM214AQ32MH5 1076 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 PAGE2BQ5JRK9 111 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TTC19Q6DKK2 380 aaPredicted RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 CLEC6AQ6EIG7 209 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 FRMD7Q6ZUT3 714 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TBC1D19Q8N5T2 526 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 UTP15Q8TED0 518 aaKnown RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 NLNQ9BYT8 704 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 SLC6A16Q9GZN6 736 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 PTGDR2Q9Y5Y4 395 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 EPG5Q9HCE0 2579 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LRIT2A6NDA9 550 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 TRIM13O60858 407 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 KLHL18O94889 574 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 OTCP00480 354 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 GBAP04062 536 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 FURINP09958 794 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 CASP2P42575 452 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 SERPINB4P48594 390 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 EFNA3P52797 238 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 CXADRP78310 365 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 RGS1Q08116 209 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LCP2Q13094 533 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 E2F2Q14209 437 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 NCF4Q15080 339 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 HIST2H2ACQ16777 129 aaPredicted RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 LIPJQ5W064 366 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 HIST2H2AA3Q6FI13 130 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 GPRIN3Q6ZVF9 776 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 LAS2Q8IYD9 372 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 L3MBTL4Q8NA19 623 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TRPV3Q8NET8 790 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 WDR20Q8TBZ3 569 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 RDH11Q8TC12 318 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 AGAP11Q8TF27 550 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 STARD8Q92502 1023 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 MS4A6EQ96DS6 147 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 CCNL2Q96S94 520 aaPredicted RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 NTMT1Q9BV86 223 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 B3GNT4Q9C0J1 378 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 REXO4Q9GZR2 422 aaKnown RBP11.27□□□□□ -0.61
APTX-227ENST00000485479 RHBGQ9H310 441 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 ZNF304Q9HCX3 659 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 TRPC4Q9UBN4 977 aa11.27□□□□□ -0.61
APTX-227ENST00000485479 PCSK5Q92824 1860 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 PDYNP01213 254 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 BPGMP07738 259 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 HBQ1P09105 142 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms