RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 ANGPTL3Q9Y5C1 460 aa15.06■□□□□ 0
UPF3A-208ENST00000484246 HEATR5BQ9P2D3 2071 aa15.05■□□□□ 0
UPF3A-208ENST00000484246 LRIT2A6NDA9 550 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 LRRC14BA6NHZ5 514 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 H0YIV9 168 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 GOLGA8RI6L899 631 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 IL1RNP18510 177 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 KRT15P19012 456 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 TAC1P20366 129 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 ATP5F1P24539 256 aaPredicted RBP15.05■□□□□ -0
UPF3A-208ENST00000484246 CRHR1P34998 444 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 SLC18A2Q05940 514 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 HIST2H2ACQ16777 129 aaPredicted RBP15.05■□□□□ -0
UPF3A-208ENST00000484246 DEFB109BQ30KR1 87 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 GGTA1PQ4G0N0 100 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 C10orf62Q5T681 223 aaPredicted RBP15.05■□□□□ -0
UPF3A-208ENST00000484246 HIST2H2AA3Q6FI13 130 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 MED27Q6P2C8 311 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 OR2W6PQ8NHA6 318 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 ZCCHC10Q8TBK6 192 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 ZNF483Q8TF39 744 aaPredicted RBP15.05■□□□□ -0
UPF3A-208ENST00000484246 MIEF2Q96C03 454 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 PHF21BQ96EK2 531 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 OR1F2PQ96R84 312 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 NTMT1Q9BV86 223 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 TRPC4Q9UBN4 977 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 ADGRE2Q9UHX3 823 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 EMCNQ9ULC0 261 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 FER1L5A0AVI2 2057 aa15.05■□□□□ -0
UPF3A-208ENST00000484246 LOC400499M0QZD8 3231 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ANKDD1BA6NHY2 528 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 SMIM23A6NLE4 172 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 BMP10O95393 424 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ZNF888P0CJ79 500 aaPredicted RBP15.04■□□□□ -0
UPF3A-208ENST00000484246 SFTPCP11686 197 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 PIK3CBP42338 1070 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 POLE2P56282 527 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 HERVK_113P63132 956 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 KLC1Q07866 573 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 IFFO1Q0D2I5 559 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 TRABD2AQ86V40 505 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 SLC22A9Q8IVM8 553 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 TMEM102Q8N9M5 508 aaPredicted RBP15.04■□□□□ -0
UPF3A-208ENST00000484246 OR2L5Q8NG80 312 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 OR7G3Q8NG95 312 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 RDH11Q8TC12 318 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ZNF473Q8WTR7 871 aaKnown RBP15.04■□□□□ -0
UPF3A-208ENST00000484246 MS4A6EQ96DS6 147 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 MAGEB10Q96LZ2 347 aaPredicted RBP15.04■□□□□ -0
UPF3A-208ENST00000484246 BBC3Q96PG8 261 aaPredicted RBP15.04■□□□□ -0
UPF3A-208ENST00000484246 CRB3Q9BUF7 120 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ERVK-6Q9BXR3 956 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 MS4A8Q9BY19 250 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 IPPKQ9H8X2 491 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ACTR8Q9H981 624 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 ZBTB26Q9HCK0 441 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 PPT2Q9UMR5 302 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 NAALAD2Q9Y3Q0 740 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 HS3ST3B1Q9Y662 390 aa15.04■□□□□ -0
UPF3A-208ENST00000484246 SEC16AO15027 2179 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 C4orf51C9J302 202 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 SGK494L7N484 410 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 OR7A17O14581 309 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 DLX3O60479 287 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 RDH16O75452 317 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 CEACAM4O75871 244 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 PROCP04070 461 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 SERPIND1P05546 499 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 HNRNPH1P31943 449 aaKnown RBP15.03■□□□□ -0
UPF3A-208ENST00000484246 OTX2P32243 289 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 CCT5P48643 541 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 PRKAA2P54646 552 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 RRADP55042 308 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 FOXL2P58012 376 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 TRAF3Q13114 568 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 ATP1A4Q13733 1029 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 CCDC153Q494R4 210 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 DEFB134Q4QY38 66 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 TMEM35AQ53FP2 167 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 SOWAHCQ53LP3 525 aaPredicted RBP15.03■□□□□ -0
UPF3A-208ENST00000484246 VWA2Q5GFL6 755 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 TOR1AIP1Q5JTV8 583 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 ADNP2Q6IQ32 1131 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 ZYG11AQ6WRX3 759 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 TMEM151BQ8IW70 566 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 EXD3Q8N9H8 876 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 OR51Q1Q8NH59 317 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 REPS1Q96D71 796 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 CCDC126Q96EE4 140 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 L3HYPDHQ96EM0 354 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 VPS50Q96JG6 964 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 FER1L6-AS2Q96M78 137 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 SOX17Q9H6I2 414 aaPredicted RBP15.03■□□□□ -0
UPF3A-208ENST00000484246 PSD3Q9NYI0 1048 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 C3orf18Q9UK00 162 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 GRID1Q9ULK0 1009 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 PLAAQ9Y263 795 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 PCDHGA11Q9Y5H2 935 aa15.03■□□□□ -0
UPF3A-208ENST00000484246 MGAQ8IWI9 3026 aa15.02■□□□□ -0
UPF3A-208ENST00000484246 LOC102723996A0A087X1L8 192 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms