RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PDHA2P29803 388 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 FASLGP48023 281 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SLC6A12P48065 614 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NME5P56597 212 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PSME3P61289 254 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 IRF8Q02556 426 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZFP36L1Q07352 338 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PRKG2Q13237 762 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GPR18Q14330 331 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NR1D2Q14995 579 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 AP5B1Q2VPB7 878 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SAMD4BQ5PRF9 694 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 C6orf136Q5SQH8 315 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LIPJQ5W064 366 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CAPN13Q6MZZ7 669 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PGM2L1Q6PCE3 622 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 AGTRAPQ6RW13 159 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MBOAT1Q6ZNC8 495 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 VASH2Q86V25 355 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 AMZ2Q86W34 360 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 FAM129CQ86XR2 697 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TRIM48Q8IWZ4 208 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SPACA3Q8IXA5 215 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RAB42Q8N4Z0 105 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 FBXO15Q8NCQ5 510 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PPFIBP2Q8ND30 876 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 WDR60Q8WVS4 1066 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SELENOMQ8WWX9 145 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 NCSTNQ92542 709 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CCDC124Q96CT7 223 aaKnown RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 MED8Q96G25 268 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PPM1MQ96MI6 270 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CDRT15Q96T59 188 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TIMM29Q9BSF4 260 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 BRINP2Q9C0B6 783 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ATG10Q9H0Y0 220 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RMI1Q9H9A7 625 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 CPNE5Q9HCH3 593 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 APMAPQ9HDC9 416 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SPAG4Q9NPE6 437 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 ADA2Q9NZK5 511 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 LEF1Q9UJU2 399 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-216ENST00000484087 SLC22A14Q9Y267 594 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 RNF11Q9Y3C5 154 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 DYRK1BQ9Y463 629 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 GPR45Q9Y5Y3 372 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 PTGDR2Q9Y5Y4 395 aa6.66□□□□□ -1.34
BRCA1-216ENST00000484087 TEX51A0A1B0GUA7 166 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 A0A1W2PP18 115 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FAM234BA2RU67 622 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FAM181BA6NEQ2 426 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF839A8K0R7 811 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 ARHGEF33A8MVX0 844 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 C9orf172C9J069 976 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 MANBAO00462 879 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FFAR3O14843 346 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 LSM1O15116 133 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 GPR42O15529 346 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 KLK10O43240 276 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 C1orf105O95561 183 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 NPPAP01160 153 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 VIPP01282 170 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 JMJD7P0C870 316 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC2A4P14672 509 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 GNAZP19086 355 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC5A2P31639 672 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 CCKBRP32239 447 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 HNF4AP41235 474 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 LSSP48449 732 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SEPHS1P49903 392 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 HTR6P50406 440 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 POLR2JP52435 117 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 PNLIPRP1P54315 467 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 DIO3P55073 304 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC34A1Q06495 639 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FOXM1Q08050 763 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 NAE1Q13564 534 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 ABRAXAS2Q15018 415 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 RCN1Q15293 331 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 CPSF6Q16630 551 aaKnown RBP eCLIP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SGO1Q5FBB7 561 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 TCHHL1Q5QJ38 904 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 UNC5DQ6UXZ4 953 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 Q6ZSR9 355 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FAM92BQ6ZTR7 304 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 TRIM46Q7Z4K8 759 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC9B2Q86UD5 537 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 THOC6Q86W42 341 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 HPS6Q86YV9 775 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 KLHDC8AQ8IYD2 350 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SYTL1Q8IYJ3 562 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 L3MBTL4Q8NA19 623 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 GLB1L3Q8NCI6 653 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 OR9I1Q8NGQ6 314 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 WDR36Q8NI36 951 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC26A7Q8TE54 656 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 FGF11Q92914 225 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 USP7Q93009 1102 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms