RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 CA5BQ9Y2D0 317 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 V9GYQ6 96 aa12.68□□□□□ -0.38
CPNE1-225ENST00000483495 UPK1AO00322 258 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 DLGAP1O14490 977 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 TOR1BO14657 336 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 KDM1AO60341 852 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 TBX19O60806 448 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-225ENST00000483495 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 C1QCP02747 245 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 BSGP35613 385 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 C2orf80Q0P641 193 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 NKG7Q16617 165 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 PTOV1Q86YD1 416 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-225ENST00000483495 ZZZ3Q8IYH5 903 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 EID3Q8N140 333 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 TMEM145Q8NBT3 493 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 TTLQ8NG68 377 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 PPCDCQ96CD2 204 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 MYCBPQ99417 103 aaPredicted RBP12.67□□□□□ -0.38
CPNE1-225ENST00000483495 SARGQ9BW04 601 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 NTN4Q9HB63 628 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 AASDHPPTQ9NRN7 309 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 VPS4AQ9UN37 437 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 COLEC10Q9Y6Z7 277 aa12.67□□□□□ -0.38
CPNE1-225ENST00000483495 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 FEZF1A0PJY2 475 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 PDLIM1O00151 329 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 GPR37L1O60883 481 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 CLEC3AO75596 197 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 PRKD3O94806 890 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 SEMA4FO95754 770 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 SRFP11831 508 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 NDUFS1P28331 727 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 AKT2P31751 481 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 GSTM5P46439 218 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 MC1RQ01726 317 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 GAB1Q13480 694 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 ADRM1Q16186 407 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 MPEG1Q2M385 716 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 VMACQ2NL98 169 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 PAGE2Q7Z2X7 111 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 CARM1Q86X55 608 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 FBXO30Q8TB52 745 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 NCLNQ969V3 563 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 SLC47A1Q96FL8 570 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 QRFPRQ96P65 431 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 F2RL3Q96RI0 385 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 UBE2ZQ9H832 354 aaPredicted RBP12.66□□□□□ -0.38
CPNE1-225ENST00000483495 ADAM29Q9UKF5 820 aa12.66□□□□□ -0.38
CPNE1-225ENST00000483495 PRAMEF33A0A0G2JMD5 474 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 A6NCN8 305 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 OR1F1O43749 312 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 LCMT2O60294 686 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SERPINA1P01009 418 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 MT-ND1P03886 318 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 IL3P08700 152 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 EFNA1P20827 205 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CD72P21854 359 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 GSTM2P28161 218 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CYP4F2P78329 520 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TFF2Q03403 129 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 VEZF1Q14119 521 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CCNYL2Q5T2Q4 361 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 ZCCHC8Q6NZY4 707 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 ADGRF3Q8IZF5 1079 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SYNPOQ8N3V7 929 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 OR4A15Q8NGL6 344 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TFAP2CQ92754 450 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF764Q96H86 408 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SORBS1Q9BX66 1292 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 ANKRD60Q9BZ19 345 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 MRPS30Q9NP92 439 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 LHX9Q9NQ69 397 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TMEM184CQ9NVA4 438 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 OR6C2Q9NZP2 312 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 RNF103-CHMP3A0A140T963 221 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 MAN2B1O00754 1011 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SCAMP1O15126 338 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 NDUFS4O43181 175 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 EML2O95834 649 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 AK4P27144 223 aaPredicted RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PEBP1P30086 187 aaKnown RBP12.65□□□□□ -0.38
CPNE1-225ENST00000483495 SHMT2P34897 504 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 MAGEA2P43356 314 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 CCR5P51681 352 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 DGKEP52429 567 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 HBA1P69905 142 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 RGNQ15493 299 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 ZIC1Q15915 447 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 PRSS53Q2L4Q9 553 aa12.65□□□□□ -0.38
CPNE1-225ENST00000483495 TMEM31Q5JXX7 168 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms