RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CFAP52Q8N1V2 620 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 TC2NQ8N9U0 490 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 NEK11Q8NG66 645 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 OR52K1Q8NGK4 314 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 SPACA9Q96E40 222 aaPredicted RBP6.34□□□□□ -1.39
CLK1-212ENST00000482590 DHTKD1Q96HY7 919 aaPredicted RBP6.34□□□□□ -1.39
CLK1-212ENST00000482590 LRIG1Q96JA1 1093 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 BTN2A3PQ96KV6 586 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 RHOXF2Q9BQY4 288 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 NEUROG2Q9H2A3 272 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 OSGEPL1Q9H4B0 414 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 POPDC2Q9HBU9 364 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 IARS2Q9NSE4 1012 aaKnown RBP6.34□□□□□ -1.39
CLK1-212ENST00000482590 SOHLH2Q9NX45 425 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 SLC12A6Q9UHW9 1150 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 TLK1Q9UKI8 766 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 NOSIPQ9Y314 301 aaKnown RBP6.34□□□□□ -1.39
CLK1-212ENST00000482590 CHTOPQ9Y3Y2 248 aaKnown RBP6.34□□□□□ -1.39
CLK1-212ENST00000482590 N6AMT1Q9Y5N5 214 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 LRP4O75096 1905 aa6.34□□□□□ -1.39
CLK1-212ENST00000482590 COL27A1Q8IZC6 1860 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3DA0A087WVF3 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3IA0A087WXS9 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3EA0A087X179 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3KA0A087X1G2 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TEX13CA0A0J9YWL9 993 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SMIM30A4D0T7 59 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3FA6NER0 549 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 ANXA2P2A6NMY6 339 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3LB9A6J9 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 PLK4O00444 970 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 RASGRF2O14827 1237 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 GNA14O95837 355 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 CALCAP01258 141 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 WNT1P04628 370 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3HP0C7X1 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 UROSP10746 265 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SLC2A3P11169 496 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 ETS1P14921 441 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 ZNF18P17022 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 GOT1P17174 413 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 NUDT1P36639 197 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 NUMBP49757 651 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 STK19P49842 368 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 NME5P56597 212 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 DNAJC3Q13217 504 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 KIF26BQ2KJY2 2108 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 FSCBQ5H9T9 825 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 KCNT1Q5JUK3 1230 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TEX35Q5T0J7 233 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 C9orf64Q5T6V5 341 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 HES3Q5TGS1 186 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 FAM46CQ5VWP2 391 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3GQ6DHY5 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3CQ6IPX1 549 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 RRM2BQ7LG56 351 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 ELMOD2Q8IZ81 293 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TBC1D3Q8IZP1 549 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 APCDD1Q8J025 514 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 STK40Q8N2I9 435 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 AADATQ8N5Z0 425 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 EID2Q8N6I1 236 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 NELFBQ8WX92 580 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 OR8D1Q8WZ84 308 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SLC9A6Q92581 669 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 RNFT2Q96EX2 444 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SERAC1Q96JX3 654 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 LMLNQ96KR4 655 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 FAM81BQ96LP2 452 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 KLHL15Q96M94 604 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 ZNF830Q96NB3 372 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 RPRD1AQ96P16 312 aaPredicted RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 INTS14Q96SY0 518 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 ZSWIM1Q9BR11 485 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SRSF8Q9BRL6 282 aaKnown RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 ZNF304Q9HCX3 659 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 JKAMPQ9P055 326 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 SEPT10Q9P0V9 454 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 VPS51Q9UID3 782 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 RUVBL1Q9Y265 456 aaKnown RBP6.33□□□□□ -1.4
CLK1-212ENST00000482590 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLK1-212ENST00000482590 CAPN7Q9Y6W3 813 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 BPTFQ12830 3046 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 RP1P56715 2156 aa6.33□□□□□ -1.4
CLK1-212ENST00000482590 A0A1W2PR77 199 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 GXYLT2A0PJZ3 443 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 MBD3L5A6NJ08 208 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 ZNF785A8K8V0 405 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 KCNU1A8MYU2 1149 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 M0QYG6 137 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 TLR4O00206 839 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 ALOX15BO15296 676 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 RRP8O43159 456 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 PLRG1O43660 514 aaKnown RBP6.32□□□□□ -1.4
CLK1-212ENST00000482590 HSF2BPO75031 334 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 SLCO2B1O94956 709 aa6.32□□□□□ -1.4
CLK1-212ENST00000482590 RASAL1O95294 804 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms