RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ACSM2AQ08AH3 577 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 PPP1R8Q12972 351 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 PRKAA1Q13131 559 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ILKQ13418 452 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 IL13RA2Q14627 380 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 PDK3Q15120 406 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RNPS1Q15287 305 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 MOGQ16653 247 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CDO1Q16878 200 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ADPRMQ3LIE5 342 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CDKL4Q5MAI5 379 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ZNF658Q5TYW1 1059 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 PRAMEF5Q5TYX0 476 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 EEF1A1P5Q5VTE0 462 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MLIPQ5VWP3 458 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 PRAMEF6Q5VXH4 476 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ACSM2BQ68CK6 577 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TXNDC8Q6A555 127 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CLEC6AQ6EIG7 209 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 NADSYN1Q6IA69 706 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CYB5D1Q6P9G0 228 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TMEM220Q6QAJ8 160 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 LEKR1Q6ZMV7 388 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 PAQR9Q6ZVX9 377 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RNF144BQ7Z419 303 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 AMIGO2Q86SJ2 522 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 LDB1Q86U70 411 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 GPR180Q86V85 440 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 VRK2Q86Y07 508 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 STX12Q86Y82 276 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MISPQ8IVT2 679 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 LRRC8AQ8IWT6 810 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CPXM2Q8N436 756 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 FBXO39Q8N4B4 442 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 BCORP1Q8N888 145 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 AMER3Q8N944 861 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 NECAB1Q8N987 351 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ADPRHL1Q8NDY3 354 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SRFBP1Q8NEF9 429 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 FAM71CQ8NEG0 241 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 EXD1Q8NHP7 514 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 B4GALNT2Q8NHY0 566 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 UBA3Q8TBC4 463 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TAS1R2Q8TE23 839 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 DQX1Q8TE96 717 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 FCGR1BQ92637 280 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RAD54LQ92698 747 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RAB1CQ92928 201 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SLCO4A1Q96BD0 722 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SPATA33Q96N06 139 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ZNF317Q96PQ6 595 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 TAAR6Q96RI8 345 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 CRAMP1Q96RY5 1269 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TMEM246Q9BRR3 403 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ELOVL1Q9BW60 279 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 ANKRD60Q9BZ19 345 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MMP27Q9H306 513 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TMEM231Q9H6L2 316 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 TMEM185BQ9H7F4 350 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 GEMIN7Q9H840 131 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 CLK4Q9HAZ1 481 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 VAT1LQ9HCJ6 419 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MRPL40Q9NQ50 206 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 SLC22A11Q9NSA0 550 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 ZCCHC3Q9NUD5 404 aaKnown RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 PAQR5Q9NXK6 330 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 CLEC5AQ9NY25 188 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 MTMR4Q9NYA4 1195 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SMARCAL1Q9NZC9 954 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 KIAA1456Q9P272 454 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 RCOR3Q9P2K3 495 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 NCKAP1Q9Y2A7 1128 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SIRT4Q9Y6E7 314 aaPredicted RBP3.93□□□□□ -1.78
VPS41-212ENST00000482217 SPATA31A5Q5VU36 1347 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 SPATA31A7Q8IWB4 1347 aa3.93□□□□□ -1.78
VPS41-212ENST00000482217 COL11A2P13942 1736 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 HEG1Q9ULI3 1381 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ARHGEF40Q8TER5 1519 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 A0A1W2PPV4 95 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 GOLGA8RI6L899 631 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 NR5A2O00482 541 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 FPGTO14772 594 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 INPPL1O15357 1258 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 BUD23O43709 281 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 CALUO43852 315 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 FCMRO60667 390 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 FCGR3BO75015 233 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SLC25A12O75746 678 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SERPINI2O75830 405 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 C1QL1O75973 258 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TM7SF2O76062 418 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PIGNO95427 931 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 MT-ND1P03886 318 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ALOX5P09917 674 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ANKRD34CP0C6C1 535 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 LINGO3P0C6S8 592 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 CCL2P13500 99 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ANXA7P20073 488 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms