RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CCDC28BQ9BUN5 200 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TPK1Q9H3S4 243 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF768Q9H5H4 540 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 EML4Q9HC35 981 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 PDE7BQ9NP56 450 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 INIPQ9NRY2 104 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ANKMY1Q9P2S6 941 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 KLK4Q9Y5K2 254 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 MDC1Q14676 2089 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 OR2A25A4D2G3 310 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TRIM64BA6NI03 449 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 TMEM114B3SHH9 223 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SULT1B1O43704 296 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ITM2AO43736 263 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 LYPLA1O75608 230 aaPredicted RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 DKK1O94907 266 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 OR4F21O95013 312 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 HSPA4LO95757 839 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ANKRD34CP0C6C1 535 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 CD22P20273 847 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 HNF4AP41235 474 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 PDX1P52945 283 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 PKNOX1P55347 436 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ERVPABLB-1P60509 514 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ABCE1P61221 599 aaKnown RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 GALNT1Q10472 559 aaPredicted RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 TRAF3Q13114 568 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ADRM1Q16186 407 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CPSF6Q16630 551 aaKnown RBP eCLIP11.09□□□□□ -0.63
HPS4-212ENST00000481910 HIST2H2ACQ16777 129 aaPredicted RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 PAGE2BQ5JRK9 111 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 HES3Q5TGS1 186 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 IL23RQ5VWK5 629 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 HIST2H2AA3Q6FI13 130 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SYVN1Q86TM6 617 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 PAQR7Q86WK9 346 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 FAM129CQ86XR2 697 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 KRT78Q8N1N4 520 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 L3MBTL4Q8NA19 623 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF740Q8NDX6 193 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 KLHL6Q8WZ60 621 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 WDR34Q96EX3 536 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 SLC41A2Q96JW4 573 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 EFCAB11Q9BUY7 163 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF395Q9H8N7 513 aaPredicted RBP11.09□□□□□ -0.63
HPS4-212ENST00000481910 FAM60AQ9NP50 221 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 ZNF225Q9UK10 706 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 CLCA2Q9UQC9 943 aa11.09□□□□□ -0.63
HPS4-212ENST00000481910 A0A0J9YVX5 310 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 KLF11O14901 512 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 OR1F1O43749 312 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 KLHL41O60662 606 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 CTSVO60911 334 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 ESRRBO95718 433 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 HGFP14210 728 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 JUPP14923 745 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 FUT4P22083 530 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 IL32P24001 234 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 ARRB2P32121 409 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 HSD17B7P56937 341 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 GUCY1A3Q02108 690 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
HPS4-212ENST00000481910 KCNAB1Q14722 419 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 ISXQ2M1V0 245 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
HPS4-212ENST00000481910 FAM209AQ5JX71 171 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 LETMD1Q6P1Q0 360 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 FBXO42Q6P3S6 717 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 CUZD1Q86UP6 607 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 TBC1D19Q8N5T2 526 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 CDYL2Q8N8U2 506 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 AGR3Q8TD06 166 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 AGAP11Q8TF27 550 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 CKAP2Q8WWK9 683 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 MAGEB18Q96M61 343 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 FCRL4Q96PJ5 515 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 DEPDC7Q96QD5 511 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 C20orf27Q9GZN8 174 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 SPNS1Q9H2V7 528 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 THAP1Q9NVV9 213 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 BTRCQ9Y297 605 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 KNTC1P50748 2209 aa11.08□□□□□ -0.64
HPS4-212ENST00000481910 LCMT2O60294 686 aaKnown RBP11.07□□□□□ -0.64
HPS4-212ENST00000481910 CSO75390 466 aaKnown RBP11.07□□□□□ -0.64
HPS4-212ENST00000481910 CRCPO75575 148 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 CCKBRP32239 447 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 MDH1P40925 334 aaKnown RBP11.07□□□□□ -0.64
HPS4-212ENST00000481910 CYP4F3Q08477 520 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 GRHL2Q6ISB3 625 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 MED27Q6P2C8 311 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 ATG14Q6ZNE5 492 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 D2HGDHQ8N465 521 aa11.07□□□□□ -0.64
HPS4-212ENST00000481910 METTL6Q8TCB7 284 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms