RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 R4GN57 208 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 AHCTF1Q8WYP5 2266 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 MAP2P11137 1827 aaKnown RBP3.23□□□□□ -1.89
COPA-204ENST00000481522 CARMIL3Q8ND23 1372 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 BSNQ9UPA5 3926 aa3.23□□□□□ -1.89
COPA-204ENST00000481522 IQGAP3Q86VI3 1631 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 PRRC2CQ9Y520 2896 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 SALL1Q9NSC2 1324 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MYO16Q9Y6X6 1858 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 DDX60Q8IY21 1712 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 NRXN2Q9P2S2 1712 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 HERC2O95714 4834 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 IGHV4-4A0A075B6R2 117 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 A0A087WW49 117 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 C2orf81A6NN90 581 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 CLDN4O14493 209 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 PTGESO14684 152 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 SPRY1O43609 319 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 AP2A2O94973 939 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 ATP5BP06576 529 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 PTGER4P35408 488 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 RPL21P46778 160 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 LHX1P48742 406 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 ALDH3A2P51648 485 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 SNRPD1P62314 119 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 KLC1Q07866 573 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 TUBB2AQ13885 445 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 UGP2Q16851 508 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 UGT3A2Q3SY77 523 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MCMDC2Q4G0Z9 681 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 ZC2HC1BQ5TFG8 222 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MFN1Q8IWA4 741 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 LSMEM2Q8N112 164 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MARVELD2Q8N4S9 558 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 THAP8Q8NA92 274 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 CCDC191Q8NCU4 936 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OR6J1Q8NGC5 347 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OR13C3Q8NGS6 347 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OR2T11Q8NH01 316 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OR4C3Q8NH37 302 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MRGPRDQ8TDS7 321 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 ROBO4Q8WZ75 1007 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 DYRK2Q92630 601 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 ZNF653Q96CK0 615 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 FAM20AQ96MK3 541 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 MUS81Q96NY9 551 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OPRPNQ99935 248 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 TUBB2BQ9BVA1 445 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 OR2B2Q9GZK3 357 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 GFRA4Q9GZZ7 299 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 CPVLQ9H3G5 476 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 TRPV4Q9HBA0 871 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 PPANQ9NQ55 473 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 FAM207AQ9NSI2 230 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 P4HTMQ9NXG6 502 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 GRID1Q9ULK0 1009 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 RNF150Q9ULK6 438 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 STUB1Q9UNE7 303 aa3.22□□□□□ -1.89
COPA-204ENST00000481522 SPTBN1Q01082 2364 aaKnown RBP3.22□□□□□ -1.89
COPA-204ENST00000481522 ARFGEF2Q9Y6D5 1785 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 NBASA2RRP1 2371 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 A0A1B0GU03 582 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 MEIOCA2RUB1 952 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 URADA6NGE7 173 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 TCERG1O14776 1098 aaKnown RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 ARPC2O15144 300 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 ARHGEF9O43307 516 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 SLCO2B1O94956 709 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 TBX6O95947 436 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 RAF1P04049 648 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 FYNP06241 537 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 GPIP06744 558 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 SAGP10523 405 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 IRF2P14316 349 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 ERCC2P18074 760 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 ACHEP22303 614 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CSTF2P33240 577 aaKnown RBP eCLIP3.21□□□□□ -1.9
COPA-204ENST00000481522 PPP5CP53041 499 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 LIMK1P53667 647 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 RBPJQ06330 500 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 TAF10Q12962 218 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 ITGA7Q13683 1181 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 VEZF1Q14119 521 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 TNIP1Q15025 636 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 PHKG1Q16816 387 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 PDLIM3Q53GG5 364 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 TCTE1Q5JU00 501 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 SLC35D3Q5M8T2 416 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 RPUSD3Q6P087 351 aaKnown RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 PSRC1Q6PGN9 363 aaPredicted RBP3.21□□□□□ -1.9
COPA-204ENST00000481522 ZNF497Q6ZNH5 498 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 STXBP4Q6ZWJ1 553 aa3.21□□□□□ -1.9
COPA-204ENST00000481522 CHST3Q7LGC8 479 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms