RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ABHD11Q8NFV4 315 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 HAS2Q92819 552 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 IMMP1LQ96LU5 166 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CYTH2Q99418 400 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 SLX1AQ9BQ83 275 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 RBCK1Q9BYM8 510 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 RNF32Q9H0A6 362 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CDC42EP4Q9H3Q1 356 aaKnown RBP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 TEKT2Q9UIF3 430 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 OSGIN2Q9Y236 505 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 NAALAD2Q9Y3Q0 740 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 SLC22A7Q9Y694 548 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CPAMD8Q8IZJ3 1885 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 IGHV3-20A0A0C4DH32 117 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 TRBC2A0A5B9 178 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF860A6NHJ4 632 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 GOLGA6L10A6NI86 522 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 RIPK2O43353 540 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 WDPCPO95876 746 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SERPIND1P05546 499 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF37AP17032 561 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SAT1P21673 171 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SKP1P63208 163 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF33BQ06732 778 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 MGAT5Q09328 741 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 HERC3Q15034 1050 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 PLAG1Q6DJT9 500 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SBSNQ6UWP8 590 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 ANKRD37Q7Z713 158 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SHISA5Q8N114 240 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 AMER2Q8N7J2 671 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 FBXO36Q8NEA4 188 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 OR4K1Q8NGD4 311 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SUN3Q8TAQ9 357 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SLC5A11Q8WWX8 675 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 PDLIM5Q96HC4 596 aaKnown RBP13.52□□□□□ -0.25
ATG4B-218ENST00000479554 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 OR4K3Q96R72 315 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 OR1F2PQ96R84 312 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SARGQ9BW04 601 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 EPB41L4BQ9H329 900 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 SAYSD1Q9NPB0 183 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 DYRK1BQ9Y463 629 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 PSAT1Q9Y617 370 aa13.52□□□□□ -0.25
ATG4B-218ENST00000479554 CELSR2Q9HCU4 2923 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CENPEQ02224 2701 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CNTRLQ7Z7A1 2325 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 FAM95CA0A1B0GW59 222 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 OR5H15A6NDH6 313 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 OR2W5A6NFC9 320 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CDC123O75794 336 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CLDN1O95832 211 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 IL10P22301 178 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 MAGEA4P43358 317 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 PER3P56645 1201 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 RGS1Q08116 209 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF844Q08AG5 666 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 PDIA2Q13087 525 aaKnown RBP13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CBLBQ13191 982 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 PWP1Q13610 501 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CSHL1Q14406 222 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 SLC29A2Q14542 456 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 FASTKD3Q14CZ7 662 aaKnown RBP13.51□□□□□ -0.25
ATG4B-218ENST00000479554 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CATSPEREQ5SY80 951 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 TMEM207Q6UWW9 146 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 STRA8Q7Z7C7 330 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 NKAPQ8N5F7 415 aaKnown RBP13.51□□□□□ -0.25
ATG4B-218ENST00000479554 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 NEIL2Q969S2 332 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 PEX11GQ96HA9 241 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 NINJ2Q9NZG7 142 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
ATG4B-218ENST00000479554 A8MUI8 341 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 LRRTM2O43300 516 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 GALR3O60755 368 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-218ENST00000479554 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ABHD2P08910 425 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 MYZAPP0CAP1 466 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ALOX12P18054 663 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 SCTRP47872 440 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 REEP5Q00765 189 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 RHAGQ02094 409 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ZNF460Q14592 562 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ABRAXAS2Q15018 415 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 EXT1Q16394 746 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 DEFB134Q4QY38 66 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 NIPAL1Q6NVV3 410 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 PAPD4Q6PIY7 484 aaKnown RBP13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ABHD13Q7L211 337 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 TMPRSS11BQ86T26 416 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 ZC3HC1Q86WB0 502 aaKnown RBP13.5□□□□□ -0.25
ATG4B-218ENST00000479554 NT5CQ8TCD5 201 aa13.5□□□□□ -0.25
ATG4B-218ENST00000479554 NR4A3Q92570 626 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms