RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TSNAXQ99598 290 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 EFCAB11Q9BUY7 163 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ALDH8A1Q9H2A2 487 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 C11orf68Q9H3H3 251 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GXYLT2A0PJZ3 443 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SLC22A1O15245 554 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LCMT2O60294 686 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 GJB1P08034 283 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MMP10P09238 476 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SPATA31D3P0C874 917 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MSX1P28360 303 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CTSKP43235 329 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ENTPD1P49961 510 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PCBD1P61457 104 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TLE1Q04724 770 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TATDN3Q17R31 274 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 EOGTQ5NDL2 527 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PM20D1Q6GTS8 502 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SPATA31D4Q6ZUB0 917 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZNF584Q8IVC4 421 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MB21D2Q8IYB1 491 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 LSMEM1Q8N8F7 131 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MFSD14AQ96MC6 490 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PARD6BQ9BYG5 372 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ADAM19Q9H013 955 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MS4A12Q9NXJ0 267 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZIM2Q9NZV7 527 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CLIC4Q9Y696 253 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CCDC163A0A0D9SF12 145 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 M0R233 179 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NRP1O14786 923 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TFECO14948 347 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 B3GAT3O94766 335 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMEM63AO94886 807 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LTA4HP09960 611 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 UQCRC2P22695 453 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GCH1P30793 250 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PPP1CAP62136 330 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 AADACL2Q6P093 401 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZNF676Q8N7Q3 588 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TPCN2Q8NHX9 752 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SLC22A8Q8TCC7 542 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 EDC3Q96F86 508 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 CARS2Q9HA77 564 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 PCDH9Q9HC56 1237 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ACKR4Q9NPB9 350 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ADAMTS1Q9UHI8 967 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SNX10Q9Y5X0 201 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CYB561D2O14569 222 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GPR39O43194 453 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TGOLN2O43493 480 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SUSD5O60279 629 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 SLC16A2P36021 539 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NRLP54845 237 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PMS2P3Q13401 168 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GLRA4Q5JXX5 417 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 IFI44Q8TCB0 444 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 C2orf15Q8WU43 125 aaKnown RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 AUTS2Q8WXX7 1259 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CPB2Q96IY4 423 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LCORQ96JN0 433 aaPredicted RBP5.28□□□□□ -1.56
USF3-202ENST00000478658 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 OR52B2Q96RD2 323 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMEM43Q9BTV4 400 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 KCNF1Q9H3M0 494 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZDHHC3Q9NYG2 299 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 KLHL42Q9P2K6 505 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CST1P01037 141 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GZMAP12544 262 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 GOT1P17174 413 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CD9P21926 228 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 CDH12P55289 794 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PEA15Q15121 130 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 FIGNQ5HY92 759 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 NOMO2Q5JPE7 1267 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MANEAQ5SRI9 462 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 TMPRSS11FQ6ZWK6 438 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 OR2T27Q8NH04 317 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ANKS1AQ92625 1134 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ARL11Q969Q4 196 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LRR1Q96L50 414 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 MAP3K14Q99558 947 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 LINC00597Q9H2U6 94 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 ZBTB26Q9HCK0 441 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 PLCXD1Q9NUJ7 323 aa5.28□□□□□ -1.56
USF3-202ENST00000478658 AMTP48728 403 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 CSNK2A1P68400 391 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 NAB2Q15742 525 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 MYLK3Q32MK0 819 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FAM174BQ3ZCQ3 159 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ZNF529Q6P280 563 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 PNCKQ6P2M8 343 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FIGLAQ6QHK4 219 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 CSNK2A3Q8NEV1 391 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ARNTL2Q8WYA1 636 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TSSK3Q96PN8 268 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 NT5DC2Q9H857 520 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FBRSQ9HAH7 460 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms