RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 SCN1BQ07699 218 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 TNK1Q13470 666 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CDH18Q13634 790 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 RCN2Q14257 317 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 KRTAP27-1Q3LI81 207 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC39A12Q504Y0 691 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 TOR1AIP1Q5JTV8 583 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SPOUT1Q5T280 376 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SUSD4Q5VX71 490 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SHEQ5VZ18 495 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM91A1Q658Y4 838 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 FAAP20Q6NZ36 180 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ZCCHC12Q6PEW1 402 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SLC24A5Q71RS6 500 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CNTN4Q8IWV2 1026 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SFRP1Q8N474 314 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ANKRD20A12PQ8NF67 263 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HEXDCQ8WVB3 486 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 P2RX5Q93086 422 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 NDNQ99608 321 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 INPP5KQ9BT40 448 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SYT11Q9BT88 431 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 FGFBP2Q9BYJ0 223 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM6Q9C030 488 aaPredicted RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 KRT23Q9C075 422 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HSD3B7Q9H2F3 369 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 CHMP4BQ9H444 224 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SPHK2Q9NRA0 654 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ANO10Q9NW15 660 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 HOOK1Q9UJC3 728 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ELF5Q9UKW6 265 aaPredicted RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 PIN4Q9Y237 131 aaKnown RBP3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 SELENOKQ9Y6D0 94 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 AP1M2Q9Y6Q5 423 aa3.38□□□□□ -1.87
SMARCA1-204ENST00000478420 ARID2Q68CP9 1835 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TRBV4-1A0A0J9YWV2 114 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM110-MUSTN1A8MSY1 372 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM86B1E9PN63 330 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 F8VVB4 439 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 F8VWA3 439 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 VEGFDO43915 354 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 PRAF2O60831 178 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 REC8O95072 547 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 DUS4LO95620 317 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 IGHEP01854 428 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 FAM86B2P0C5J1 330 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM49P0CI25 452 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TRIM49CP0CI26 452 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 SFTPCP11686 197 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 F3P13726 295 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 FERP16591 822 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 ADRA2CP18825 462 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CASTP20810 708 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 PBLDP30039 288 aaPredicted RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 PRKCIP41743 596 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 RABIFP47224 123 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 OR3A2P47893 321 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 NT5C2P49902 561 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 XGP55808 180 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM132DQ14C87 1099 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 LBHQ53QV2 105 aaPredicted RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 FGD3Q5JSP0 725 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TTC27Q6P3X3 843 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 FUT10Q6P4F1 479 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 NOTUMQ6P988 496 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CYB5D1Q6P9G0 228 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TMEM270Q6UE05 265 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CCBE1Q6UXH8 406 aaPredicted RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 ISLR2Q6UXK2 745 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 GBP6Q6ZN66 633 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 Q6ZRP5 223 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 SPATA19Q7Z5L4 167 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 PHLDB2Q86SQ0 1253 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 DZIP1Q86YF9 867 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CCDC60Q8IWA6 550 aaPredicted RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 GPC2Q8N158 579 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 HDDC3Q8N4P3 179 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 RTL3Q8N8U3 475 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 GBP7Q8N8V2 638 aaPredicted RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 LRTM2Q8N967 370 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 OR5T2Q8NGG2 359 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 OR4C15Q8NGM1 316 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 OCC1Q8TAD7 63 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 ZNF519Q8TB69 540 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 SLCO2A1Q92959 643 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 NSMCE3Q96MG7 304 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 GDAP1L1Q96MZ0 367 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CRACR2AQ9BSW2 395 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 CDK19Q9BWU1 502 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 TDRD1Q9BXT4 1180 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 RAVER2Q9HCJ3 691 aaKnown RBP3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 IL36AQ9UHA7 158 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 IL19Q9UHD0 177 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 APPL1Q9UKG1 709 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 RNF215Q9Y6U7 377 aa3.37□□□□□ -1.87
SMARCA1-204ENST00000478420 KPNA7A9QM74 516 aa3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.36□□□□□ -1.87
SMARCA1-204ENST00000478420 BOLA2-SMG1P6H3BVE0 249 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms