RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PLD3Q8IV08 490 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 FBXW8Q8N3Y1 598 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 RAB42Q8N4Z0 105 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 LKAAEAR1Q8TD35 194 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 PEX11GQ96HA9 241 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 CAPZA3Q96KX2 299 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 CCDC138Q96M89 665 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 MACROD1Q9BQ69 325 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 CARD6Q9BX69 1037 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 GBA3Q9H227 469 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 EPB41L4BQ9H329 900 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 IL1RL2Q9HB29 575 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 YAE1D1Q9NRH1 226 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 ZNF701Q9NV72 531 aaPredicted RBP6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 PCYOX1Q9UHG3 505 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 TTC7AQ9ULT0 858 aaPredicted RBP6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 ERVK-11Q9UQG0 969 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 EIF3LQ9Y262 564 aaKnown RBP6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 PCDHA3Q9Y5H8 950 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 NFS1Q9Y697 457 aa6.78□□□□□ -1.32
SPTLC1-205ENST00000477888 KCNE1BA0A087WTH5 132 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 TRGV5A0A0B4J1U4 118 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 OR51F1A6NGY5 319 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 DEFB108AA8MXU0 73 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 AHRRA9YTQ3 701 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 RNF223E7ERA6 249 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 G3V3Y1 287 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 HAT1O14929 419 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 CASKO14936 926 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 RDH16O75452 317 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 IL2RAP01589 272 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 TP53P04637 393 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 APOA4P06727 396 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 FHP07954 510 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 ERGP11308 486 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 TPH1P17752 444 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 FOXN2P32314 431 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 THBS2P35442 1172 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 SSR4P51571 173 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 GPR143P51810 404 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 AGFG1P52594 562 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 NR1H2P55055 460 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 MEF2AQ02078 507 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 ACSF3Q4G176 576 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 CCDC38Q502W7 563 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 ICE2Q659A1 982 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 C20orf204Q6ZNR8 217 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 GPALPP1Q8IXQ4 340 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 CYP4X1Q8N118 509 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 OR5T3Q8NGG3 340 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 STYXQ8WUJ0 223 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 ROBO4Q8WZ75 1007 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 SMPDL3AQ92484 453 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 TM4SF19Q96DZ7 209 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 FAM173AQ9BQD7 235 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 WDR83Q9BRX9 315 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 RBCK1Q9BYM8 510 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 LDAHQ9H6V9 325 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 SEMA4BQ9NPR2 832 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 UTP6Q9NYH9 597 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 C6orf203Q9P0P8 240 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 SPATA7Q9P0W8 599 aa6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 FEZ2Q9UHY8 353 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF223Q9UK11 482 aaPredicted RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 PPIEQ9UNP9 301 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 YARS2Q9Y2Z4 477 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 AAR2Q9Y312 384 aaKnown RBP6.77□□□□□ -1.33
SPTLC1-205ENST00000477888 SVEP1Q4LDE5 3571 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 A0A087X0T9 212 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 IGKV3D-11A0A0A0MRZ8 115 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TRBV11-1A0A0K0K1C0 115 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TCRBV16S1A1N1A0A5B0 115 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 MROH6A6NGR9 719 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 A8MV72 311 aaPredicted RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 A8MVJ9 347 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 H7BY64 318 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CTIFO43310 598 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CST8O60676 142 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 OR2J2O76002 312 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 OR6B1O95007 311 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 IL18BPO95998 194 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 FAM228BP0C875 321 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 HOXB1P14653 301 aaPredicted RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CTSSP25774 331 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 MSNP26038 577 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 RPA3P35244 121 aaPredicted RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 OPRM1P35372 400 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CCNFP41002 786 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CLCN2P51788 898 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 ADARP55265 1226 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 BTG2P78543 158 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 SRSF2Q01130 221 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 SIX1Q15475 284 aaPredicted RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF750Q32MQ0 723 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 MFSD7Q6UXD7 560 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 IL20RBQ6UXL0 311 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 ABHD13Q7L211 337 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms