RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PON3Q15166 354 aa18■□□□□ 0.47
VARS2-209ENST00000477288 FAM182AQ5T1J6 154 aa18■□□□□ 0.47
VARS2-209ENST00000477288 SUSD1Q6UWL2 747 aa18■□□□□ 0.47
VARS2-209ENST00000477288 ZNF516Q92618 1163 aa18■□□□□ 0.47
VARS2-209ENST00000477288 DPAGT1Q9H3H5 408 aa18■□□□□ 0.47
VARS2-209ENST00000477288 PRKD3O94806 890 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 SOX14O95416 240 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 HTR1AP08908 422 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 SELENOVP59797 346 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 SEMA3AQ14563 771 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 USF2Q15853 346 aaPredicted RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 TPRG1Q6ZUI0 275 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 OR10Q1Q8NGQ4 319 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 HSPBAP1Q96EW2 488 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 CMKLR1Q99788 373 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 TMEM121BQ9BXQ6 578 aaPredicted RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 OR51B5Q9H339 312 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 KDELR3O43731 214 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 PIK3CBP42338 1070 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 GRIK2Q13002 908 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 LACTB2Q53H82 288 aaPredicted RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 SPATA6Q9NWH7 488 aaPredicted RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 SALL4Q9UJQ4 1053 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 KCNS2Q9ULS6 477 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 ABCG2Q9UNQ0 655 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 A6NCN8 305 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 ANKRD66B4E2M5 251 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 SOX1O00570 391 aaPredicted RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 ARPC2O15144 300 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 GRID2O43424 1007 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 OAS1P00973 400 aaKnown RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 RFC2P35250 354 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 GDF5P43026 501 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 IST1P53990 364 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 ITPRIPL2Q3MIP1 535 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 LY6G5CQ5SRR4 150 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 C3orf33Q6P1S2 294 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 CASTOR1Q8WTX7 329 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 LAMP5Q9UJQ1 280 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 ITM2AO43736 263 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 KCNJ13O60928 360 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 H6PDO95479 791 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 TMBIM1Q969X1 311 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 PLCL2Q9UPR0 1127 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 A8MT66 165 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 TMEM63AO94886 807 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 ADAM15Q13444 863 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 RBM20Q5T481 1227 aaKnown RBP17.99■□□□□ 0.47
VARS2-209ENST00000477288 OR56A1Q8NGH5 318 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 TUBGCP5Q96RT8 1024 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 EBF2Q9HAK2 575 aa17.99■□□□□ 0.47
VARS2-209ENST00000477288 A0A1B0GVC2 190 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 MLLT10P55197 1068 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 MOV10Q9HCE1 1003 aaKnown RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 PCDHB14Q9Y5E9 798 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 MANBAO00462 879 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 DIRAS1O95057 198 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 CDRT1O95170 752 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 NID2Q14112 1375 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 PLEKHG6Q3KR16 790 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 DRICH1Q6PGQ1 229 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 SYCE2Q6PIF2 218 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 OR4F6Q8NGB9 312 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 OR8K3Q8NH51 312 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 CPNE2Q96FN4 548 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 MEAF6Q9HAF1 191 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 IL21RQ9HBE5 538 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 OXSMQ9NWU1 459 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 GALPQ9UBC7 116 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 IL1R2P27930 398 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 RNF144AP50876 292 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 ZNF267Q14586 743 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 NKAPLQ5M9Q1 402 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 TMCO2Q7Z6W1 182 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 CD300LFQ8TDQ1 290 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 DNAJA3Q96EY1 480 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 CD180Q99467 661 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 SGIP1Q9BQI5 828 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 WRAP73Q9P2S5 460 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 OAZ3Q9UMX2 235 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 TLX2O43763 284 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 GNAO1P09471 354 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 PHC1P78364 1004 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 CDK6Q00534 326 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 IRF5Q13568 498 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 TMIGD1Q6UXZ0 262 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 NIPA2Q8N8Q9 360 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 Q9Y3F1 56 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 HAPLN1P10915 354 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 PREPP48147 710 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 FXYD6P3P58550 94 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 ECH1Q13011 328 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 OR5J2Q8NH18 312 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 C9orf43Q8TAL5 461 aaPredicted RBP17.98■□□□□ 0.47
VARS2-209ENST00000477288 ITPAQ9BY32 194 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 SMOC2Q9H3U7 446 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 RHCGQ9UBD6 479 aa17.98■□□□□ 0.47
VARS2-209ENST00000477288 SH2B3Q9UQQ2 575 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms