RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 XKRXQ6PP77 449 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SHISA6Q6ZSJ9 500 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 NEK10Q6ZWH5 1172 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 COX15Q7KZN9 410 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 FJX1Q86VR8 437 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PALM2Q8IXS6 379 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 KRT222Q8N1A0 295 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TBC1D19Q8N5T2 526 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 CSNK1A1LQ8N752 337 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 NR4A3Q92570 626 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 INPP5DQ92835 1189 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 MMABQ96EY8 250 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-214ENST00000477152 HES6Q96HZ4 224 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF354BQ96LW1 612 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 IL17FQ96PD4 163 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SLX1AQ9BQ83 275 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 DPH7Q9BTV6 452 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 MENTQ9BUN1 341 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 DRC3Q9H069 523 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 PCBD2Q9H0N5 130 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 CTSFQ9UBX1 484 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SEC14L3Q9UDX4 400 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 TFR2Q9UP52 801 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 KLHL20Q9Y2M5 609 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 COMMD10Q9Y6G5 202 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 DUSP10Q9Y6W6 482 aa6.89□□□□□ -1.31
BRCA1-214ENST00000477152 SPTAN1Q13813 2472 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 MDC1Q14676 2089 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ARHGAP10A1A4S6 786 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 OR2A25A4D2G3 310 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 IDSB3KWA1 339 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZBTB14O43829 449 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 KIF5CO60282 957 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 FTCDO95954 541 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PRR35P0CG20 571 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ENO3P13929 434 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 IL10P22301 178 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 MCM3P25205 808 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 GRK3P35626 688 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 AGTR2P50052 363 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 TNFSF10P50591 281 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF75DP51815 510 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 SESN2P58004 480 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 IKZF1Q13422 519 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 THOC5Q13769 683 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 FAM53BQ14153 422 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 RPS6KA1Q15418 735 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 OASLQ15646 514 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 CCNG2Q16589 344 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 CPSF6Q16630 551 aaKnown RBP eCLIP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 THEMIS2Q5TEJ8 643 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 UGT3A1Q6NUS8 523 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF534Q76KX8 674 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 GDF7Q7Z4P5 450 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ADCK2Q7Z695 626 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 SLC13A5Q86YT5 568 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 VRK3Q8IV63 474 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 LMNTD2Q8IXW0 634 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PRSS58Q8IYP2 241 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZNF808Q8N4W9 903 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 METTL27Q8N6F8 245 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 OR2A1Q8NGT9 310 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 CALML6Q8TD86 181 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 NRTNQ99748 197 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PLCD4Q9BRC7 762 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 P2RY12Q9H244 342 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ZBTB20Q9HC78 741 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 CHRAC1Q9NRG0 131 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 INTS10Q9NVR2 710 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 KLHL42Q9P2K6 505 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 SLC2A6Q9UGQ3 507 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 NTNG1Q9Y2I2 539 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 BSNQ9UPA5 3926 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 HIVEP3Q5T1R4 2406 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 USP9XQ93008 2570 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 IGHV1-45A0A0A0MS14 117 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 TRGV8A0A0C4DH27 118 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 A0A1W2PQ72 361 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 C7orf72A4D263 438 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 CTAGE9A4FU28 777 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 OR5H15A6NDH6 313 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 IQCF5A8MTL0 148 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 H0YGG7 62 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 H0YIG0 161 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 E2F3O00716 465 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 TTI1O43156 1089 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 NRDCO43847 1150 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PRAMEF2O60811 474 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 MATN4O95460 622 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 RNF224P0DH78 156 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 C8orf89P0DMQ9 161 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 COX6B1P14854 86 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 FMO4P31512 558 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 BDKRB1P46663 353 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PNLIPRP1P54315 467 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 TAS2R50P59544 299 aa6.88□□□□□ -1.31
BRCA1-214ENST00000477152 ARF3P61204 181 aaPredicted RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PRDX1Q06830 199 aaKnown RBP6.88□□□□□ -1.31
BRCA1-214ENST00000477152 PTK6Q13882 451 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms