RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NANOGP8Q6NSW7 305 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 DHDDSQ86SQ9 333 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ANKRD46Q86W74 232 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 SDR16C5Q8N3Y7 309 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 OR2A5Q96R48 311 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ELF4Q99607 663 aaPredicted RBP13.79□□□□□ -0.2
COL4A6-206ENST00000477085 NANOGQ9H9S0 305 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 SLC25A37Q9NYZ2 338 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 VAPAQ9P0L0 249 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 TNRC6BQ9UPQ9 1833 aaKnown RBP13.79□□□□□ -0.2
COL4A6-206ENST00000477085 FRYLO94915 3013 aa13.79□□□□□ -0.2
COL4A6-206ENST00000477085 ARHGAP10A1A4S6 786 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ACOT8O14734 319 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 SCAMP2O15127 329 aaKnown RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZW10O43264 779 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 HCRTR1O43613 425 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TMPRSS11DO60235 418 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 DFNA5O60443 496 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MYF5P13349 255 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 S100A3P33764 101 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 CDKN2CP42773 168 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PLA2G16P53816 162 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TAS2R50P59544 299 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZNF763Q0D2J5 394 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PWP1Q13610 501 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MAPKAPK3Q16644 382 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 GTDC1Q4AE62 458 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZNF385BQ569K4 471 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 C1orf146Q5VVC0 180 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZNF793Q6ZN11 406 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 FAM9CQ8IZT9 166 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TTLQ8NG68 377 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MIEF2Q96C03 454 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MS4A6EQ96DS6 147 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TM4SF19Q96DZ7 209 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZC3H10Q96K80 434 aaKnown RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 REXO4Q9GZR2 422 aaKnown RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PCDHAC1Q9H158 963 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ABCG4Q9H172 646 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 NKX1-2Q9UD57 310 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 FBXO4Q9UKT5 387 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 LOC105369274A0A096LPK9 316 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TRBV5-3A0A0A0MS03 114 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 LOC102723532A0A0G2JNH3 316 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TRIM38O00635 465 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 UBXN7O94888 489 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 NPPAP01160 153 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 COX7A2P14406 83 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PCSK2P16519 638 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ME2P23368 584 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ASMTP46597 345 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 RXRGP48443 463 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 FOXM1Q08050 763 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 COL9A2Q14055 689 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MPEG1Q2M385 716 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 C14orf28Q4W4Y0 310 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 CCNYL2Q5T2Q4 361 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 KANSL1Q7Z3B3 1105 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 OOSP2Q86WS3 158 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 OR4N4Q8N0Y3 316 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 OR8J2Q8NGG1 315 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 BAHD1Q8TBE0 780 aaPredicted RBP13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PIGKQ92643 395 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 UCN3Q969E3 161 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 ZUFSPQ96AP4 578 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 RGMAQ96B86 450 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 TM4SF18Q96CE8 201 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 COQ8BQ96D53 544 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 C17orf62Q9BQA9 187 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 SLC6A16Q9GZN6 736 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 IKZF5Q9H5V7 419 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 PRDM7Q9NQW5 492 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 AHSPQ9NZD4 102 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 POMT2Q9UKY4 750 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 MAN2B2Q9Y2E5 1009 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 RNF215Q9Y6U7 377 aa13.78□□□□□ -0.2
COL4A6-206ENST00000477085 A0A0J9YVX5 310 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 A0A0J9YY10 115 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 CASC3O15234 703 aaKnown RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 P2RX6O15547 441 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 CIB2O75838 187 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 IL3P08700 152 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 FURINP09958 794 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 GNSP15586 552 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 EFNA1P20827 205 aaPredicted RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 KIR3DL1P43629 444 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 RPS15AP62244 130 aaKnown RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 SRSF11Q05519 484 aaKnown RBP13.77□□□□□ -0.21
COL4A6-206ENST00000477085 C2orf80Q0P641 193 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 PDE7AQ13946 482 aa13.77□□□□□ -0.21
COL4A6-206ENST00000477085 MUM1Q2TAK8 710 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms