RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 CNOT10Q9H9A5 744 aaKnown RBP11.77□□□□□ -0.53
APTX-220ENST00000476858 RRAGDQ9NQL2 400 aaPredicted RBP11.77□□□□□ -0.53
APTX-220ENST00000476858 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 GPRC5BQ9NZH0 403 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 COPG2Q9UBF2 871 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 ZNF225Q9UK10 706 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 PCTPQ9UKL6 214 aa11.77□□□□□ -0.53
APTX-220ENST00000476858 IGHV3-20A0A0C4DH32 117 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 IQANK1A0A1B0GTG1 560 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 TLDC2A0PJX2 215 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 A6NL46 340 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 SAP18O00422 153 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 RTCAO00442 366 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 BMP10O95393 424 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 NSA2O95478 260 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 ETHE1O95571 254 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 ALBP02768 609 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 COL6A2P12110 1019 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 ALOX12P18054 663 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 CASP2P42575 452 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 CCL11P51671 97 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 NEK2P51955 445 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 CDH13P55290 713 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 EEF1A2Q05639 463 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 KCNAB2Q13303 367 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 PWP1Q13610 501 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 GTF2H2Q13888 395 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 RUNX2Q13950 521 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 SSPNQ14714 243 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 GTF2H2CQ6P1K8 395 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 KLC3Q6P597 504 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 CCDC91Q7Z6B0 441 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 C4orf33Q8N1A6 199 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 ZNF843Q8N446 348 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 TMEM52Q8NDY8 209 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 OR51Q1Q8NH59 317 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 APOBEC4Q8WW27 367 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 CCT6BQ92526 530 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 CAVIN3Q969G5 261 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 MIEF2Q96C03 454 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 MS4A6EQ96DS6 147 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 PTCD3Q96EY7 689 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 ABHD17AQ96GS6 310 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 PEX11GQ96HA9 241 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 MRPL57Q9BQC6 102 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 CRB3Q9BUF7 120 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 ING2Q9H160 280 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 MRPL46Q9H2W6 279 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 NOL11Q9H8H0 719 aaKnown RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 WDR54Q9H977 334 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 LANCL2Q9NS86 450 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 ZNF282Q9UDV7 671 aaPredicted RBP11.76□□□□□ -0.53
APTX-220ENST00000476858 C3orf18Q9UK00 162 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 FBXL4Q9UKA2 621 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 RAB21Q9UL25 225 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 MAP4K5Q9Y4K4 846 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 SLC22A7Q9Y694 548 aa11.76□□□□□ -0.53
APTX-220ENST00000476858 SPENQ96T58 3664 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 MYOCOSA0A1B0GUC4 107 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 LRIT2A6NDA9 550 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 IDSB3KWA1 339 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 G3V2L1 256 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TGFBR3LH3BV60 316 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 PYCARD-AS1I3L0S3 204 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TXNDC9O14530 226 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 CHST10O43529 356 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 SERPINA6P08185 405 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 RPS17P08708 135 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 RBP1P09455 135 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 NUDT17P0C025 328 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 SLC35G6P0C7Q6 338 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 PCNAP12004 261 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 EPB42P16452 691 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 XCR1P46094 333 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 HNRNPFP52597 415 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 TRAF3Q13114 568 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 NDUFA9Q16795 377 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TSNAXIP1Q2TAA8 658 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 UNC50Q53HI1 259 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TCHHL1Q5QJ38 904 aaPredicted RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 ZNF793Q6ZN11 406 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 PTRH1Q86Y79 214 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 LAS2Q8IYD9 372 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 OR7G3Q8NG95 312 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 OR11G2Q8NGC1 345 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 ZNF483Q8TF39 744 aaPredicted RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 ZNF473Q8WTR7 871 aaKnown RBP11.75□□□□□ -0.53
APTX-220ENST00000476858 TSLPQ969D9 159 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 MTBPQ96DY7 904 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 TMEM237Q96Q45 408 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
APTX-220ENST00000476858 NUDT9Q9BW91 350 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms