RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SMIM24O75264 130 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CDH16O75309 829 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 ALOX12BO75342 701 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 SH3BGRLO75368 114 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 KLHL18O94889 574 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 SERPINA6P08185 405 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 PIM1P11309 404 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-208ENST00000476739 ALOX12P18054 663 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 KRT15P19012 456 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 TSPAN8P19075 237 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CXCR2P25025 360 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 HNRNPH1P31943 449 aaKnown RBP9.18□□□□□ -0.94
HDAC3-208ENST00000476739 AVPR1BP47901 424 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 PIK3CGP48736 1102 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CDH13P55290 713 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 POLE2P56282 527 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 RGS1Q08116 209 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 RASA2Q15283 850 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 DEFB134Q4QY38 66 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 TOR1AIP1Q5JTV8 583 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 GRHL2Q6ISB3 625 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 MRGPREQ86SM8 312 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 C4orf33Q8N1A6 199 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 MREGQ8N565 214 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 TBC1D19Q8N5T2 526 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 TRPV3Q8NET8 790 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 OR52B6Q8NGF0 335 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 OR51Q1Q8NH59 317 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CCT6BQ92526 530 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CATSPER2Q96P56 530 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 C17orf62Q9BQA9 187 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 TACO1Q9BSH4 297 aaKnown RBP9.18□□□□□ -0.94
HDAC3-208ENST00000476739 EFCAB11Q9BUY7 163 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 FAM117AQ9C073 453 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
HDAC3-208ENST00000476739 IPPKQ9H8X2 491 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 WDR54Q9H977 334 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 SEMA4BQ9NPR2 832 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-208ENST00000476739 PCTPQ9UKL6 214 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 CDC14AQ9UNH5 594 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 PLAAQ9Y263 795 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 MAN2B2Q9Y2E5 1009 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 RNF11Q9Y3C5 154 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 MAP4K5Q9Y4K4 846 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 ANGPTL3Q9Y5C1 460 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 SLC22A7Q9Y694 548 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 BSNQ9UPA5 3926 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 LRIT2A6NDA9 550 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 G3V2L1 256 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 K7EM74 188 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 SOCS6O14544 535 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 CLEC3AO75596 197 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 BMP10O95393 424 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 GSTA1P08263 222 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 RPS17P08708 135 aaKnown RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 PCNAP12004 261 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 CREB1P16220 341 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 KRT4P19013 534 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 CCR10P46092 362 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 OCA2Q04671 838 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 IFFO1Q0D2I5 559 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 UNC50Q53HI1 259 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 FAAH2Q6GMR7 532 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 UBE3DQ7Z6J8 389 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 TRABD2AQ86V40 505 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 LAS2Q8IYD9 372 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF483Q8TF39 744 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF473Q8WTR7 871 aaKnown RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 APOBEC4Q8WW27 367 aaKnown RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 SLC39A7Q92504 469 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 C8orf44Q96CB5 159 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 MS4A6EQ96DS6 147 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 PEX11GQ96HA9 241 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 TMEM237Q96Q45 408 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 F2RL3Q96RI0 385 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 ARHGAP9Q9BRR9 750 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 CRB3Q9BUF7 120 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 C1QTNF3Q9BXJ4 246 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 RBCK1Q9BYM8 510 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 TGIF2Q9GZN2 237 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 RHBGQ9H310 441 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 ACTR8Q9H981 624 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 PPCSQ9HAB8 311 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 MKKSQ9NPJ1 570 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 P4HTMQ9NXG6 502 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 DCDC2Q9UHG0 476 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 LGALS13Q9UHV8 139 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 C3orf18Q9UK00 162 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 TNPO3Q9Y5L0 923 aaKnown RBP9.17□□□□□ -0.94
HDAC3-208ENST00000476739 HS3ST3B1Q9Y662 390 aa9.17□□□□□ -0.94
HDAC3-208ENST00000476739 SMG1Q96Q15 3661 aaKnown RBP9.16□□□□□ -0.94
HDAC3-208ENST00000476739 TNRC6AQ8NDV7 1962 aaKnown RBP9.16□□□□□ -0.94
HDAC3-208ENST00000476739 ANKDD1BA6NHY2 528 aa9.16□□□□□ -0.94
HDAC3-208ENST00000476739 IDSB3KWA1 339 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms