RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 GOT1L1Q8NHS2 421 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 FBXO30Q8TB52 745 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBR4-212ENST00000475973 MCOLN3Q8TDD5 553 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CSGALNACT1Q8TDX6 532 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 FIG4Q92562 907 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 RORBQ92753 470 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TAMM41Q96BW9 452 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SDCCAG3Q96C92 435 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 COQ8BQ96D53 544 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ECHDC3Q96DC8 303 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 LGALS12Q96DT0 336 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TCEAL4Q96EI5 215 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TRMT2BQ96GJ1 504 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 LMLNQ96KR4 655 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 CCDC138Q96M89 665 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 HEPHQ9BQS7 1158 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NACA2Q9H009 215 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 DSN1Q9H410 356 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SLC32A1Q9H598 525 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 ARMC7Q9H6L4 198 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SIAEQ9HAT2 523 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NEUROD4Q9HD90 331 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 IL26Q9NPH9 171 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TRPV5Q9NQA5 729 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 AASDHPPTQ9NRN7 309 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 FARSBQ9NSD9 589 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 CCDC59Q9P031 241 aaKnown RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 ERVK-18Q9QC07 812 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 NFKBIL1Q9UBC1 381 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 OPTCQ9UBM4 332 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 EVLQ9UI08 416 aaPredicted RBP6.62□□□□□ -1.35
UBR4-212ENST00000475973 PSORS1C1Q9UIG5 152 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 FBXO4Q9UKT5 387 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 INVSQ9Y283 1065 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 TRAPPC4Q9Y296 219 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 PCDHGC4Q9Y5F7 938 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 PCDHGA6Q9Y5G7 932 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 KLK4Q9Y5K2 254 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 SNX5Q9Y5X3 404 aa6.62□□□□□ -1.35
UBR4-212ENST00000475973 A0A075B6Q4 140 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 SLC35F4A4IF30 521 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 ARRDC5A6NEK1 342 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 NCF1BA6NI72 391 aaPredicted RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 SAGE2PA6NJ88 616 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 IQCF5A8MTL0 148 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 NCF1CA8MVU1 366 aaPredicted RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 HEPACAM2A8MVW5 462 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 EIF1AYO14602 144 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 DSCR3O14972 297 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 RGS10O43665 173 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 PCDHGA12O60330 932 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 MITFO75030 526 aaPredicted RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 GMNNO75496 209 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 STK16O75716 305 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 UPK1BO75841 260 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CLDN9O95484 217 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 KRT6AP02538 564 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 KRT6BP04259 564 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 C1SP09871 688 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 SP9P0CG40 484 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 PABPC1P11940 636 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 HSD3B1P14060 373 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 GLULP15104 373 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 BPIP17213 487 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 PRPS1L1P21108 318 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 ENDOUP21128 410 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 PRKACGP22612 351 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 FCARP24071 287 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CHMP24386 653 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 EEF1B2P24534 225 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 TACR1P25103 407 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 HSD3B2P26439 372 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 AOAHP28039 575 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 GABRR2P28476 465 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CCR2P41597 374 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CDKN2CP42773 168 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 SLC15A1P46059 708 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 KRT6CP48668 564 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 SMCPP49901 116 aaPredicted RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 HNMTP50135 292 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 SGSHP51688 502 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 KCNJ10P78508 379 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 VLDLRP98155 873 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 B4GALNT1Q00973 533 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 HMGCS1Q01581 520 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 EEF1A2Q05639 463 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 PIGFQ07326 219 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CSTF3Q12996 717 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 SP140Q13342 867 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 LAPTM5Q13571 262 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 LRRC32Q14392 662 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
UBR4-212ENST00000475973 UGT8Q16880 541 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 DUOXA1Q1HG43 343 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 ZNF181Q2M3W8 571 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 TRIM16LQ309B1 348 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 ZNF528Q3MIS6 628 aa6.61□□□□□ -1.35
UBR4-212ENST00000475973 CATSPEREQ5SY80 951 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms