RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ZCCHC8Q6NZY4 707 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 GALNT18Q6P9A2 607 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 MBOAT1Q6ZNC8 495 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 Q6ZSR9 355 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ZFAND4Q86XD8 727 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PLXDC1Q8IUK5 500 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 NAGSQ8N159 534 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ARL14Q8N4G2 192 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 FNDC5Q8NAU1 212 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 VPS37AQ8NEZ2 397 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 GPR156Q8NFN8 814 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 OR2A1Q8NGT9 310 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 OR10G6Q8NH81 332 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 WDR48Q8TAF3 677 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 WDR20Q8TBZ3 569 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 AGR3Q8TD06 166 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SNRNP27Q8WVK2 155 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 KCNE4Q8WWG9 221 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 NEIL2Q969S2 332 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ERP27Q96DN0 273 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 RAB3IPQ96QF0 476 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 OR4K3Q96R72 315 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 HOPXQ9BPY8 73 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SLC25A23Q9BV35 468 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 LRRC61Q9BV99 259 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CCDC106Q9BWC9 280 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 NLNQ9BYT8 704 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TWSG1Q9GZX9 223 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 WDR55Q9H6Y2 383 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CPNE5Q9HCH3 593 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PRM3Q9NNZ6 103 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 SDR39U1Q9NRG7 319 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 C1GALT1Q9NS00 363 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 NLGN3Q9NZ94 848 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 BCAP29Q9UHQ4 241 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 KLF15Q9UIH9 416 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 ADAM29Q9UKF5 820 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 NDUFAF1Q9Y375 327 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 FIS1Q9Y3D6 152 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TIMM22Q9Y584 194 aa6.73□□□□□ -1.33
SHQ1-207ENST00000475558 PCYT1BQ9Y5K3 369 aaPredicted RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 CFAP20Q9Y6A4 193 aaKnown RBP6.73□□□□□ -1.33
SHQ1-207ENST00000475558 TDRD6O60522 2096 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 OR5K3A6NET4 321 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 LRRC14BA6NHZ5 514 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CAPN14A8MX76 684 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 H7BY64 318 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TRIM38O00635 465 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ZSCAN9O15535 394 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 PEX11AO75192 247 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SLC22A3O75751 556 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 UBXN7O94888 489 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 PDYNP01213 254 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 IL6P05231 212 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SNRPB2P08579 225 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 EPORP19235 508 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 PRDX3P30048 256 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SCTRP47872 440 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 GABREP78334 506 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 RGS1Q08116 209 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ACSM2AQ08AH3 577 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 KLF10Q13118 480 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ART3Q13508 389 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TUBB3Q13509 450 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TSTA3Q13630 321 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 LY6DQ14210 128 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SLBPQ14493 270 aaKnown RBP eCLIP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ABRAXAS2Q15018 415 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 RBBP5Q15291 538 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 NR6A1Q15406 480 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ZXDCQ2QGD7 858 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 C18orf21Q32NC0 220 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CCSMST1Q4G0I0 132 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TPRG1LQ5T0D9 272 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 DEPDC1Q5TB30 811 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CDCP2Q5VXM1 449 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ACSM2BQ68CK6 577 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CYB5D1Q6P9G0 228 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 R3HCC1LQ7Z5L2 792 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TMPRSS11BQ86T26 416 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 BPHLQ86WA6 291 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 KMT5CQ86Y97 462 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ADGRF3Q8IZF5 1079 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CAMKVQ8NCB2 501 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 ZNF548Q8NEK5 533 aaPredicted RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 OR2L3Q8NG85 312 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 OR4C6Q8NH72 309 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CCL4L1Q8NHW4 92 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 SLC37A2Q8TED4 501 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 CHTF18Q8WVB6 975 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 TTC9Q92623 222 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 NAT6Q93015 286 aa6.72□□□□□ -1.33
SHQ1-207ENST00000475558 POP5Q969H6 163 aaKnown RBP6.72□□□□□ -1.33
SHQ1-207ENST00000475558 RGMAQ96B86 450 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms