RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MRPS25P82663 173 aaKnown RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ADORA2A-AS1P86434 159 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 USP10Q14694 798 aaKnown RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 HERC3Q15034 1050 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 OR1C1Q15619 314 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 INAQ16352 499 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF766Q5HY98 468 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 PRAMEF9Q5VWM5 478 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 PAPD4Q6PIY7 484 aaKnown RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 NXPE4Q6UWF7 544 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 THOC6Q86W42 341 aaKnown RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZC3HC1Q86WB0 502 aaKnown RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SIAH3Q8IW03 269 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 CEP97Q8IW35 865 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 KLHL7Q8IXQ5 586 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SPATA6LQ8N4H0 392 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 NFAM1Q8NET5 270 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 NT5CQ8TCD5 201 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SLC5A11Q8WWX8 675 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 MARVELD3Q96A59 401 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TBC1D20Q96BZ9 403 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 CFAP36Q96G28 342 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SCMH1Q96GD3 660 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF354BQ96LW1 612 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TSNARE1Q96NA8 513 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TRIM51Q9BSJ1 452 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 HAUS8Q9BT25 410 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 NAT9Q9BTE0 207 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 FAM129AQ9BZQ8 928 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SLC6A16Q9GZN6 736 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 TSPAN10Q9H1Z9 355 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-207ENST00000475549 KCNK13Q9HB14 408 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 KLHL1Q9NR64 748 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SMYD2Q9NRG4 433 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 COPG2Q9UBF2 871 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SEC14L3Q9UDX4 400 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZFP69BQ9UJL9 534 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 CHMP2BQ9UQN3 213 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 SLC22A14Q9Y267 594 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 ZNF835Q9Y2P0 537 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 PCDHGB6Q9Y5F9 930 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 PDZD2O15018 2839 aa6.59□□□□□ -1.35
HDAC3-207ENST00000475549 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.36
HDAC3-207ENST00000475549 CROCCQ5TZA2 2017 aa6.59□□□□□ -1.36
HDAC3-207ENST00000475549 ADGRG4Q8IZF6 3080 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 DOCK10Q96BY6 2186 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TACC2O95359 2948 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 GOLGA6L10A0A0M3HER8 536 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 NPEPPSL1A6NEC2 478 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 GABRR3A8MPY1 467 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 E7ESA3 106 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TGFBR3LH3BV60 316 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CCL21O00585 134 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TAPBPO15533 448 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TTI1O43156 1089 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SLC19A2O60779 497 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SEC31AO94979 1220 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CRYABP02511 175 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SERPIND1P05546 499 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ENO2P09104 434 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SLC35G6P0C7Q6 338 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SAT1P21673 171 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 IL10P22301 178 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TPP2P29144 1249 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 GRK3P35626 688 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 AHRP35869 848 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CA7P43166 264 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 KCNC1P48547 511 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 AGTR2P50052 363 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 GPR143P51810 404 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 NR0B1P51843 470 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PER3P56645 1201 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 OR4D2P58180 307 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 AP2B1P63010 937 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 HSF1Q00613 529 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 REEP5Q00765 189 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 DR1Q01658 176 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ACTN3Q08043 901 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CBLBQ13191 982 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 RUNX2Q13950 521 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 FRG1Q14331 258 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 CSHL1Q14406 222 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 MORF4L2Q15014 288 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 EXT1Q16394 746 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 C3AR1Q16581 482 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 MEP1AQ16819 746 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ADNP2Q6IQ32 1131 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SLCO4C1Q6ZQN7 724 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 NCCRP1Q6ZVX7 275 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 FGD2Q7Z6J4 655 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 MRGPRGQ86SM5 289 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PALM2Q8IXS6 379 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SRRM1Q8IYB3 904 aaKnown RBP6.58□□□□□ -1.36
HDAC3-207ENST00000475549 SLC34A3Q8N130 599 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 PDIK1LQ8N165 341 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
HDAC3-207ENST00000475549 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms