RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ANXA5P08758 320 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ERVK-10P10266 1014 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TXNP10599 105 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CKMT1AP12532 417 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 RNH1P13489 461 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 HSD3B1P14060 373 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TSHRP16473 764 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ZNF26P17031 533 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 NDUFB7P17568 137 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 EEF1B2P24534 225 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 AOAHP28039 575 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 HLA-DMAP28067 261 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TACR3P29371 465 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FMO4P31512 558 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CHRNA3P32297 505 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 EPHX2P34913 555 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 GRIA1P42261 906 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 NME5P56597 212 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PER3P56645 1201 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 KCNK10P57789 538 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ANTXR2P58335 489 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 KIAA1024LP59773 190 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 HTRA4P83105 476 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SP2Q02086 613 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ROM1Q03395 351 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 EPS8Q12929 822 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 GAGE1Q13065 139 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 MAPK7Q13164 816 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 IRF4Q15306 451 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 GPR68Q15743 365 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 EXOC3L4Q17RC7 722 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 MICBQ29980 383 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 RFX4Q33E94 735 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 UGT3A2Q3SY77 523 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SLC36A3Q495N2 470 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TRIM60Q495X7 471 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TMEM35AQ53FP2 167 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 DNLZQ5SXM8 178 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TEDDM1Q5T9Z0 273 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PLA2G4FQ68DD2 849 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CDC73Q6P1J9 531 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM111BQ6SJ93 734 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TEX261Q6UWH6 196 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM92BQ6ZTR7 304 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SMIM15Q7Z3B0 74 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SZRD1Q7Z422 152 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PRPF39Q86UA1 669 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SGMS1Q86VZ5 419 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 RFX6Q8HWS3 928 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CPNE9Q8IYJ1 553 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 C12orf45Q8N5I9 185 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 OR2L3Q8NG85 312 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 OR2L8Q8NGY9 312 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 UBA3Q8TBC4 463 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FBXO25Q8TCJ0 367 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PIGKQ92643 395 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ART4Q93070 314 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TMEM143Q96AN5 459 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 RNF31Q96EP0 1072 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ZBED3Q96IU2 234 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CLPTM1LQ96KA5 538 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM84BQ96KN1 310 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 GPR137Q96N19 417 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FCRL4Q96PJ5 515 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 LENG8Q96PV6 779 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 DCLRE1CQ96SD1 692 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CDCA3Q99618 268 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FOXB1Q99853 325 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 MTG1Q9BT17 334 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SOX7Q9BT81 388 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CCDC32Q9BV29 185 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SF3B5Q9BWJ5 86 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TSSK1BQ9BXA7 367 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 C1QTNF1Q9BXJ1 281 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CPEB1Q9BZB8 566 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 DERL2Q9GZP9 239 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 AP5M1Q9H0R1 490 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 DNTTIP1Q9H147 329 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 DSN1Q9H410 356 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 FAM96AQ9H5X1 160 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PDE7BQ9NP56 450 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ABCB10Q9NRK6 738 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SPASTQ9UBP0 616 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 SCML1Q9UN30 329 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 CTNND2Q9UQB3 1225 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 BTBD3Q9Y2F9 522 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 TCAF1Q9Y4C2 921 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PCDHB1Q9Y5F3 818 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 U3KQ87 197 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ZNFX1Q9P2E3 1918 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 MYH2Q9UKX2 1941 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 ZNF609O15014 1411 aa5.78□□□□□ -1.48
ECHDC1-215ENST00000475319 PIK3C2AO00443 1686 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 ANKRD26Q9UPS8 1709 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 M0QZK8 103 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 M0R3G1 203 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 KLF11O14901 512 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 FRS3O43559 492 aa5.77□□□□□ -1.49
ECHDC1-215ENST00000475319 NUDT21O43809 227 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms