RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 COG8Q96MW5 612 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CCNL2Q96S94 520 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF382Q96SR6 550 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GPER1Q99527 375 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SLC39A3Q9BRY0 314 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 EDEM2Q9BV94 578 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 POLR2J2Q9GZM3 115 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 POLR2J3Q9H1A7 115 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 XYLT2Q9H1B5 865 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 MLXIPLQ9NP71 852 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CXXC1Q9P0U4 656 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SLC6A5Q9Y345 797 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 MED31Q9Y3C7 131 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DDX60LQ5H9U9 1706 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 hCG_1809904A0A1W2PP81 198 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 A0A1W2PPE2 198 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 A0A1W2PR64 198 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 A0A1W2PRV1 198 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TRBC2A0A5B9 178 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TMEM221A6NGB7 291 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 FAM25AB3EWG3 89 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 FAM25CB3EWG5 89 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 FAM25GB3EWG6 89 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 BHMG1C9JSJ3 638 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 C5orf67F2Z3F1 127 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 M0R296 226 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DBIP07108 87 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PIRTP0C851 137 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PNMTP11086 282 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 COX4I1P13073 169 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PCMT1P22061 227 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ABHD18Q0P651 414 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ADAM15Q13444 863 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 FASTKD3Q14CZ7 662 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DGUOKQ16854 277 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZMAT1Q5H9K5 638 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 OTUD3Q5T2D3 398 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SYPL2Q5VXT5 272 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 KCTD18Q6PI47 426 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SYCE2Q6PIF2 218 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 B3GNT9Q6UX72 402 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 NPAS3Q8IXF0 933 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GPR137CQ8N3F9 429 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 C2CD4AQ8NCU7 369 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 OR5T3Q8NGG3 340 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 OR2L2Q8NH16 312 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 NETO1Q8TDF5 533 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 MTFMTQ96DP5 389 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZBTB10Q96DT7 871 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SLC47A1Q96FL8 570 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF559Q9BR84 538 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 BHLHE41Q9C0J9 482 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 WDR55Q9H6Y2 383 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DNMT3BQ9UBC3 853 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SAMHD1Q9Y3Z3 626 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ST14Q9Y5Y6 855 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SCN4AP35499 1836 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF670-ZNF695F2Z2N8 137 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GPR171O14626 319 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SURF4O15260 269 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 HCN1O60741 890 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GALR3O60755 368 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 RFPL2O75678 378 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 LINGO3P0C6S8 592 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ANPEPP15144 967 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CFL1P23528 166 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 HSD11B1P28845 292 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 VIPR2P41587 438 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 LEPRP48357 1165 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CDK9P50750 372 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 CASP9P55211 416 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 HSD11B2P80365 405 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DCDP81605 110 aaKnown RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF846Q147U1 533 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 LRIT3Q3SXY7 679 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 C14orf28Q4W4Y0 310 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 RAB41Q5JT25 222 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 PNCKQ6P2M8 343 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TTC27Q6P3X3 843 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 NXPE4Q6UWF7 544 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 C6orf15Q6UXA7 325 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DEF8Q6ZN54 512 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GCNT7Q6ZNI0 430 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZZZ3Q8IYH5 903 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 DEFB107AQ8IZN7 70 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 UBE2J2Q8N2K1 259 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 AMER2Q8N7J2 671 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 SFXN5Q8TD22 340 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 IPCEF1Q8WWN9 437 aaPredicted RBP4.46□□□□□ -1.7
CCNL1-215ENST00000474539 IGSF8Q969P0 613 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 MUCL1Q96DR8 90 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ASB16Q96NS5 453 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 HHIPQ96QV1 700 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GPR22Q99680 433 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ATG10Q9H0Y0 220 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 RERGLQ9H628 205 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 GAREM1Q9H706 876 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
CCNL1-215ENST00000474539 ADAP2Q9NPF8 381 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms