RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 MAGEB17A8MXT2 336 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 EIF3HO15372 352 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL7A1-209ENST00000474432 TAPBPO15533 448 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 MAN1A2O60476 641 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 PRAMEF4O60810 478 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 CLDN1O95832 211 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 SERPIND1P05546 499 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 IL10P22301 178 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 AGTR2P50052 363 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 BTBD16Q32M84 506 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 SFT2D3Q587I9 215 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 PRAMEF9Q5VWM5 478 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 FCRLBQ6BAA4 426 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 SLCO4C1Q6ZQN7 724 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 TMPRSS11BQ86T26 416 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 SPATA6LQ8N4H0 392 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 DERL2Q9GZP9 239 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 GPAMQ9HCL2 828 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 NSMCE4AQ9NXX6 385 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 C19orf25Q9UFG5 118 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-209ENST00000474432 DYRK1BQ9Y463 629 aa17.47■□□□□ 0.39
COL7A1-209ENST00000474432 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL7A1-209ENST00000474432 OR5H15A6NDH6 313 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 PHGDHO43175 533 aaKnown RBP17.46■□□□□ 0.39
COL7A1-209ENST00000474432 TBX6O95947 436 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-209ENST00000474432 FHP07954 510 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 GMPRP36959 345 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 HNMTP50135 292 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 RAB8AP61006 207 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 POU4F1Q01851 419 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 ABRAXAS2Q15018 415 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 TGFBIQ15582 683 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 NSDHLQ15738 373 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 PAPD4Q6PIY7 484 aaKnown RBP17.46■□□□□ 0.39
COL7A1-209ENST00000474432 ZDHHC24Q6UX98 284 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 ADAMTSL2Q86TH1 951 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 TBC1D20Q96BZ9 403 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 GPR22Q99680 433 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 RBBP8Q99708 897 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 AIF1LQ9BQI0 150 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 TMEM79Q9BSE2 394 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 STMN3Q9NZ72 180 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 COPG2Q9UBF2 871 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 KCNE2Q9Y6J6 123 aa17.46■□□□□ 0.39
COL7A1-209ENST00000474432 TEX15Q9BXT5 2789 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 A8MUI8 341 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 NDC80O14777 642 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 WISP2O76076 250 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 GGT5P36269 586 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 HNF4AP41235 474 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 AP2B1P63010 937 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 BTG2P78543 158 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 SRSF11Q05519 484 aaKnown RBP17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ZNF33BQ06732 778 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 RGS1Q08116 209 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 CALCOCO2Q13137 446 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ELOAQ14241 798 aaKnown RBP17.45■□□□□ 0.38
COL7A1-209ENST00000474432 USP10Q14694 798 aaKnown RBP17.45■□□□□ 0.38
COL7A1-209ENST00000474432 OR4D1Q15615 310 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ZKSCAN8Q15776 578 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-209ENST00000474432 C4orf17Q53FE4 359 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ACER2Q5QJU3 275 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ABHD17BQ5VST6 288 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 FAM180AQ6UWF9 173 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 MAATS1Q7Z4T9 603 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 CRLF3Q8IUI8 442 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 BEST3Q8N1M1 668 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 BCORP1Q8N888 145 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 TRPV3Q8NET8 790 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 M1APQ8TC57 530 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 ANP32BQ92688 251 aaKnown RBP17.45■□□□□ 0.38
COL7A1-209ENST00000474432 UBXN10Q96LJ8 280 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 EGFL8Q99944 293 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 MMP25Q9NPA2 562 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 OLAHQ9NV23 265 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 OSGIN2Q9Y236 505 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 CENPEQ02224 2701 aa17.45■□□□□ 0.38
COL7A1-209ENST00000474432 NOTCH2Q04721 2471 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 IGKV3D-11A0A0A0MRZ8 115 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 FAM227AF5H4B4 570 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 WDR47O94967 919 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 SERPINA6P08185 405 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 CCDC166P0CW27 439 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 C1GALT1C1LP0DN25 315 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 CD1DP15813 335 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 MST1P26927 711 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 KCNC1P48547 511 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 ST13P50502 369 aaKnown RBP17.44■□□□□ 0.38
COL7A1-209ENST00000474432 SLC26A5P58743 744 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 ETF1P62495 437 aaKnown RBP17.44■□□□□ 0.38
COL7A1-209ENST00000474432 RBBP5Q15291 538 aaKnown RBP17.44■□□□□ 0.38
COL7A1-209ENST00000474432 INAQ16352 499 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 EXT1Q16394 746 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 FBXO48Q5FWF7 155 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 C3orf62Q6ZUJ4 267 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 ABHD13Q7L211 337 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 VN1R5Q7Z5H4 357 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL7A1-209ENST00000474432 TBC1D19Q8N5T2 526 aa17.44■□□□□ 0.38
COL7A1-209ENST00000474432 FBXO25Q8TCJ0 367 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms