RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PMPCAQ10713 525 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TSTA3Q13630 321 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 KCNJ11Q14654 390 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TYSND1Q2T9J0 566 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ACSBG2Q5FVE4 666 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ARHGAP11AQ6P4F7 1023 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 DNAJC14Q6Y2X3 702 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PPP1R21Q6ZMI0 780 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CNGA4Q8IV77 575 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 SULF2Q8IWU5 870 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 LRRC56Q8IYG6 542 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CLYBLQ8N0X4 340 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ARMC10Q8N2F6 343 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 VWA5B2Q8N398 1253 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 LRRC57Q8N9N7 239 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZFP62Q8NB50 900 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 FBXO15Q8NCQ5 510 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PLPP5Q8NEB5 264 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PPHLN1Q8NEY8 458 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 C16orf52Q8NHV5 167 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZCCHC10Q8TBK6 192 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF480Q8WV37 535 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ATG4AQ8WYN0 398 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 LPGAT1Q92604 370 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TMEM125Q96AQ2 219 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM136AQ96C01 138 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 CCDC138Q96M89 665 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PRAP1Q96NZ9 151 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ALPK1Q96QP1 1244 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 OR1F2PQ96R84 312 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 EBNA1BP2Q99848 306 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 MACROD1Q9BQ69 325 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ETNK1Q9HBU6 452 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 FAM114A2Q9NRY5 505 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 TREX1Q9NSU2 369 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF358Q9NW07 568 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 DNAJB12Q9NXW2 375 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 GALPQ9UBC7 116 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 ANAPC5Q9UJX4 755 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 KLF13Q9Y2Y9 288 aaPredicted RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PCDHA13Q9Y5I0 950 aa4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 PHF3Q92576 2039 aaKnown RBP4.8□□□□□ -1.64
SNRNP40-204ENST00000474025 SAGE2PA6NJ88 616 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 USP27XA6NNY8 438 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 AKR1B15C9JRZ8 316 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 H3BMM5 538 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 KLRC4-KLRK1H3BQV0 150 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CBFA2T2O43439 604 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PROM1O43490 865 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PEX1O43933 1283 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PDE9AO76083 593 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ESR1P03372 595 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 APRTP07741 180 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 FHP07954 510 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 IL10P22301 178 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 IMPA1P29218 277 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 FMO4P31512 558 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 FDFT1P37268 417 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 COILP38432 576 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ADARP55265 1226 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 GPR85P60893 370 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ADAM8P78325 824 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CRADDP78560 199 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 LTBQ06643 244 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 TBX2Q13207 712 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 RPS6KA1Q15418 735 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 OASLQ15646 514 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 KLHL38Q2WGJ6 581 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 RNF187Q5TA31 235 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 THEMIS2Q5TEJ8 643 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ACAD11Q709F0 780 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CXXC5Q7LFL8 322 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 MDGA2Q7Z553 956 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CAMKMTQ7Z624 323 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 REXO1L1PQ8IX06 675 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CYP4Z2PQ8N1L4 340 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 AFAP1L2Q8N4X5 818 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 KCT2Q8NC54 265 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CAMKVQ8NCB2 501 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 MYRIPQ8NFW9 859 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 OR5T3Q8NGG3 340 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 OR52N2Q8NGI0 321 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 OR5M3Q8NGP4 307 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 GIMAP7Q8NHV1 300 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 MCOLN3Q8TDD5 553 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ZNF592Q92610 1267 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 TBC1D20Q96BZ9 403 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 MBD6Q96DN6 1003 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 TM4SF19Q96DZ7 209 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 RMND5BQ96G75 393 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SLC30A3Q99726 388 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 SMR3AQ99954 134 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 GPATCH1Q9BRR8 931 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 POLDIP3Q9BY77 421 aaKnown RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CLEC4MQ9H2X3 399 aaPredicted RBP4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 ANKHQ9HCJ1 492 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 CHRAC1Q9NRG0 131 aa4.79□□□□□ -1.64
SNRNP40-204ENST00000474025 RAB6BQ9NRW1 208 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms