RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 SLC6A16Q9GZN6 736 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 NOL11Q9H8H0 719 aaKnown RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 HCN3Q9P1Z3 774 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 MID2Q9UJV3 735 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 C3orf18Q9UK00 162 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 PCDHGA11Q9Y5H2 935 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 KCNMB2Q9Y691 235 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 DSPP15924 2871 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 CELSR3Q9NYQ7 3312 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 LRRC14BA6NHZ5 514 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 VSTM2BA6NLU5 285 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 A8MT66 165 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 MKRN2OSH3BPM6 223 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 PSMD12O00232 456 aaPredicted RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 E2F3O00716 465 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 FFAR3O14843 346 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 GPR42O15529 346 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 RDH16O75452 317 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 WFS1O76024 890 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 CLDN9O95484 217 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 MYL2P10916 166 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 EPORP19235 508 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 MMP11P24347 488 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 POLE2P56282 527 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 MAT1AQ00266 395 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 KLC1Q07866 573 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 PCDH1Q08174 1060 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 TTC19Q6DKK2 380 aaPredicted RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 TRIM40Q6P9F5 258 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 CHSY3Q70JA7 882 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 PRSS41Q7RTY9 318 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 CYP4X1Q8N118 509 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 AFAP1L2Q8N4X5 818 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 AMER3Q8N944 861 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 UTP15Q8TED0 518 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 CREB3L4Q8TEY5 395 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 METTL21AQ8WXB1 218 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 SLC39A7Q92504 469 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 GAL3ST3Q96A11 431 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 SPSB2Q99619 263 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 TGIF2Q9GZN2 237 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 ROGDIQ9GZN7 287 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 ING2Q9H160 280 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 ADNPQ9H2P0 1102 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 RHBGQ9H310 441 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 CLK4Q9HAZ1 481 aaKnown RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 MKL2Q9ULH7 1088 aa13.03□□□□□ -0.32
USF1-205ENST00000473969 ZNF490Q9ULM2 529 aaPredicted RBP13.03□□□□□ -0.32
USF1-205ENST00000473969 LAMA5O15230 3695 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 LRIT2A6NDA9 550 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ZNF860A6NHJ4 632 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 IDSB3KWA1 339 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 PCDH17O14917 1159 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ERI3O43414 337 aaKnown RBP13.02□□□□□ -0.33
USF1-205ENST00000473969 GALR3O60755 368 aaPredicted RBP13.02□□□□□ -0.33
USF1-205ENST00000473969 PRAMEF4O60810 478 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 SUPT7LO94864 414 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 OTCP00480 354 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 UMODP07911 640 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CD22P20273 847 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CRHR1P34998 444 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 XCR1P46094 333 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CCL11P51671 97 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 HERVK_113P63132 956 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 BTN3A2P78410 334 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ATP1A4Q13733 1029 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 DDX39BQ13838 428 aaKnown RBP13.02□□□□□ -0.33
USF1-205ENST00000473969 CPSF6Q16630 551 aaKnown RBP eCLIP13.02□□□□□ -0.33
USF1-205ENST00000473969 LINC00303Q3SY05 128 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 KRT71Q3SY84 523 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 PRAMEF9Q5VWM5 478 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 MILR1Q7Z6M3 343 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 MRGPREQ86SM8 312 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CROCCP2Q86T23 111 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 APLFQ8IW19 511 aaPredicted RBP13.02□□□□□ -0.33
USF1-205ENST00000473969 C4orf33Q8N1A6 199 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CLEC1AQ8NC01 280 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ADAMTS17Q8TE56 1095 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 CMTM7Q96FZ5 175 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ERVK-6Q9BXR3 956 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 KLHL31Q9H511 634 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 SEMA4BQ9NPR2 832 aaPredicted RBP13.02□□□□□ -0.33
USF1-205ENST00000473969 P4HTMQ9NXG6 502 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 PCTPQ9UKL6 214 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 STK38LQ9Y2H1 464 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 SEC16AO15027 2179 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 ZZEF1O43149 2961 aa13.02□□□□□ -0.33
USF1-205ENST00000473969 FOXO6A8MYZ6 492 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 AGPSO00116 658 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms