RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TBC1D13Q9NVG8 400 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 RNF186Q9NXI6 227 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 NINJ2Q9NZG7 142 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 NUDCQ9Y266 331 aa3.84□□□□□ -1.79
BRCA1-212ENST00000473961 RRBP1Q9P2E9 1410 aaKnown RBP3.84□□□□□ -1.79
BRCA1-212ENST00000473961 IGHV4-61A0A0C4DH41 118 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CCDC162PA2VCL2 907 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SLC15A5A6NIM6 579 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SLC28A1O00337 649 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SMAD6O43541 496 aaKnown RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 EXTL3O43909 919 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 FGF17O60258 216 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 OR6A2O95222 327 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 IGHV4-59P01825 116 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 DLATP10515 647 aaKnown RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CD59P13987 128 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ANPEPP15144 967 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 PAX1P15863 534 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 GOT1P17174 413 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CCNA2P20248 432 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CEACAM8P31997 349 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 HPDP32754 393 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 KIF5BP33176 963 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CD86P42081 329 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 THBS3P49746 956 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CCZ1BP86790 482 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CCZ1P86791 482 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 XKR6Q5GH73 641 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 WBP2NLQ6ICG8 309 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 OLFM4Q6UX06 510 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ANO5Q75V66 913 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 NLRP14Q86W24 1093 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 GPC2Q8N158 579 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ELMOD1Q8N336 334 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 FBXW8Q8N3Y1 598 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ARL6IP6Q8N6S5 226 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 LMNTD1Q8N9Z9 388 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SIDT2Q8NBJ9 832 aaKnown RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 RNASE8Q8TDE3 154 aaKnown RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 HAS2Q92819 552 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SLCO4A1Q96BD0 722 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 C14orf79Q96F83 325 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 DTD2Q96FN9 168 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 EPSTI1Q96J88 318 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 LPAR4Q99677 370 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 POLE3Q9NRF9 147 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 PANK4Q9NVE7 773 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 FBXL4Q9UKA2 621 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 ELF5Q9UKW6 265 aaPredicted RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 EXOC7Q9UPT5 735 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SH3GLB1Q9Y371 365 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 KIF3AQ9Y496 699 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 CLIP1P30622 1438 aa3.83□□□□□ -1.8
BRCA1-212ENST00000473961 MYH14Q7Z406 1995 aaKnown RBP3.83□□□□□ -1.8
BRCA1-212ENST00000473961 MAPKBP1O60336 1514 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 DHX29Q7Z478 1369 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TRBV5-5A0A0J9YX44 114 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 MACROD2A1Z1Q3 448 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 FAM172BPA6NC97 362 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ANTXRLA6NF34 631 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 A8MVM7 634 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CHUKO15111 745 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PSMD3O43242 534 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 BUB3O43684 328 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ACSL4O60488 711 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GMNNO75496 209 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PPP1R3DO95685 299 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CRYAAP02489 173 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PGK2P07205 417 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PRSS1P07477 247 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GHRP10912 638 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ETS1P14921 441 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CYP3A5P20815 502 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CTNNA2P26232 953 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CCND2P30279 289 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 SRD5A2P31213 254 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ALDH3B1P43353 468 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 MAGEA11P43364 429 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GPC3P51654 580 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CLCN4P51793 760 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 HNRNPFP52597 415 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 B3GALT5-AS1P59052 145 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 LINC00205P59089 165 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 SRP54P61011 504 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 HTD2P86397 168 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 TRA2AQ13595 282 aaKnown RBP eCLIP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GRB14Q14449 540 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 RBM39Q14498 530 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 KRT31Q15323 416 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CARTPTQ16568 116 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 GPR33Q49SQ1 333 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 ZC2HC1CQ53FD0 456 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 FASTKD1Q53R41 847 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 C12orf60Q5U649 245 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 CAPRIN2Q6IMN6 1127 aaKnown RBP3.82□□□□□ -1.8
BRCA1-212ENST00000473961 SLC27A4Q6P1M0 643 aa3.82□□□□□ -1.8
BRCA1-212ENST00000473961 PRSS57Q6UWY2 283 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms