RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 EXOSC4Q9NPD3 245 aaKnown RBP5.9□□□□□ -1.47
HERC4-209ENST00000473533 IL26Q9NPH9 171 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 NMRK2Q9NPI5 230 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 SPATA6Q9NWH7 488 aaPredicted RBP5.9□□□□□ -1.47
HERC4-209ENST00000473533 SIRT5Q9NXA8 310 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 MS4A12Q9NXJ0 267 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 ATP6V1HQ9UI12 483 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 SLCO3A1Q9UIG8 710 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 TSR3Q9UJK0 312 aaKnown RBP5.9□□□□□ -1.47
HERC4-209ENST00000473533 RAB23Q9ULC3 237 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 GSTK1Q9Y2Q3 226 aa5.9□□□□□ -1.47
HERC4-209ENST00000473533 NT5C1B-RDH14C9J2C7 533 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 MYL12BO14950 172 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 PROM1O43490 865 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 STC2O76061 302 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 LRATO95237 230 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CFL1P23528 166 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 FSHRP23945 695 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 AOAHP28039 575 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CRISP1P54107 249 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CDH12P55289 794 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 SNRPD1P62314 119 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 CHRNEQ04844 493 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 SCARB2Q14108 478 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ANGPT1Q15389 498 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 LRRC26Q2I0M4 334 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TMEM44Q2T9K0 475 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TRIM60Q495X7 471 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CRB2Q5IJ48 1285 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF362Q5T0B9 420 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 DDI2Q5TDH0 399 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 SPNS2Q8IVW8 549 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 VWA5B2Q8N398 1253 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 SLC5A8Q8N695 610 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 OR7G1Q8NGA0 311 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 OR4C15Q8NGM1 316 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ENKURQ8TC29 256 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ASB11Q8WXH4 323 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TTC9Q92623 222 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 COQ7Q99807 217 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CCM2Q9BSQ5 444 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TTPALQ9BTX7 342 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ALOXE3Q9BYJ1 711 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 OR51E2Q9H255 320 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF408Q9H9D4 720 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ISYNA1Q9NPH2 558 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 SLC6A13Q9NSD5 602 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 MRPL39Q9NYK5 338 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 FAM8A1Q9UBU6 413 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 KLHL21Q9UJP4 597 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 N6AMT1Q9Y5N5 214 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ENPP4Q9Y6X5 453 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF106Q9H2Y7 1883 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF670-ZNF695F2Z2N8 137 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TMCC2O75069 709 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 VIPP01282 170 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 RB1P06400 928 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ANXA4P09525 319 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 IL7P13232 177 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 BPIP17213 487 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 GABRB1P18505 474 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 HLA-DMAP28067 261 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 C21orf33P30042 268 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 TNFSF8P32971 234 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 SLC19A1P41440 591 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 LIMK1P53667 647 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 POLR2LP62875 67 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 MLLT11Q13015 90 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 LAPTM4AQ15012 233 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 KLHL22Q53GT1 634 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 XKR6Q5GH73 641 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 TMEM201Q5SNT2 666 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 LCN1P1Q5VSP4 162 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CXorf57Q6NSI4 855 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 IKBIPQ70UQ0 350 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF767PQ75MW2 155 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 CCDC71Q8IV32 467 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 ZNF557Q8N988 423 aaPredicted RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 PROKR2Q8NFJ6 384 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 B3GNT7Q8NFL0 401 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ANGPTL6Q8NI99 470 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 NR4A3Q92570 626 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 BARD1Q99728 777 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 CHST8Q9H2A9 424 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 NIPAL2Q9H841 368 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 GPR83Q9NYM4 423 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 NDUFAF4Q9P032 175 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
HERC4-209ENST00000473533 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 ASB4Q9Y574 426 aa5.89□□□□□ -1.47
HERC4-209ENST00000473533 IGLV3-16A0A075B6K0 115 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZNF840PA6NDX5 716 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 ZAR1LA6NP61 321 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 C5orf58C9J3I9 102 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 GFYI3L273 518 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TNFRSF10AO00220 468 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 TBL1XO60907 577 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 SCN2BO60939 215 aa5.88□□□□□ -1.47
HERC4-209ENST00000473533 DIRAS1O95057 198 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms