RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 FAM136AQ96C01 138 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 ETNK1Q9HBU6 452 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 TIMMDC1Q9NPL8 285 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 DMRT3Q9NQL9 472 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 CHRAC1Q9NRG0 131 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 TFR2Q9UP52 801 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 SLC22A7Q9Y694 548 aa17.73■□□□□ 0.43
SORT1-203ENST00000471996 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 MFAP3LO75121 409 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 JAK1P23458 1154 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 KCNJ11Q14654 390 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 FLYWCH1Q4VC44 716 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 WDR53Q7Z5U6 358 aaPredicted RBP17.72■□□□□ 0.43
SORT1-203ENST00000471996 ASPGQ86U10 573 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 FBXO15Q8NCQ5 510 aaPredicted RBP17.72■□□□□ 0.43
SORT1-203ENST00000471996 FAM222BQ8WU58 562 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 SMC6Q96SB8 1091 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 DEPPQ9NTK1 212 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 GALPQ9UBC7 116 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 CBLCQ9ULV8 474 aa17.72■□□□□ 0.43
SORT1-203ENST00000471996 GOLGA6L9A6NEM1 432 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 H3BMM5 538 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 ACOT7O00154 380 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 SYT5O00445 386 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 TUBB4AP04350 444 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 TPM1P09493 284 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 CHRM3P20309 590 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 HERC3Q15034 1050 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 RGS9BPQ6ZS82 235 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 CHSY3Q70JA7 882 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 SLC26A11Q86WA9 606 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 KRTAP1-3Q8IUG1 177 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 SLC35B2Q8TB61 432 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 LPGAT1Q92604 370 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 ALG3Q92685 438 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 PTCHD1Q96NR3 888 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 FAM129AQ9BZQ8 928 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 TREX1Q9NSU2 369 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 CSPG4Q6UVK1 2322 aa17.71■□□□□ 0.43
SORT1-203ENST00000471996 PINLYPA6NC86 204 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 FAM166BA8MTA8 275 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 B4GALT2O60909 372 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 DNAJB6O75190 326 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 ITGA10O75578 1167 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 LY6G6DO95868 133 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 SYF2O95926 243 aaKnown RBP17.7■□□□□ 0.42
SORT1-203ENST00000471996 IGHG3P01860 377 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 ESR1P03372 595 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 UQCRC1P31930 480 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 FDFT1P37268 417 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 COILP38432 576 aaPredicted RBP17.7■□□□□ 0.42
SORT1-203ENST00000471996 PLGLB1Q02325 96 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 DAZAP2Q15038 168 aaPredicted RBP17.7■□□□□ 0.42
SORT1-203ENST00000471996 PCID2Q5JVF3 399 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
SORT1-203ENST00000471996 QSOX2Q6ZRP7 698 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 REXO1L1PQ8IX06 675 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 AFAP1L2Q8N4X5 818 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 PSD4Q8NDX1 1056 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 ZNF395Q9H8N7 513 aaPredicted RBP17.7■□□□□ 0.42
SORT1-203ENST00000471996 NEUROD4Q9HD90 331 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 KCMF1Q9P0J7 381 aa17.7■□□□□ 0.42
SORT1-203ENST00000471996 HRNRQ86YZ3 2850 aaPredicted RBP17.69■□□□□ 0.42
SORT1-203ENST00000471996 A0A1B0GVC2 190 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 FAM47E-STBD1D6RA91 191 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 E7EVH7 732 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 CHST10O43529 356 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 LCMT2O60294 686 aaKnown RBP17.69■□□□□ 0.42
SORT1-203ENST00000471996 WDR1O75083 606 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 IMPA1P29218 277 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 ADARP55265 1226 aaKnown RBP17.69■□□□□ 0.42
SORT1-203ENST00000471996 BTG2P78543 158 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 RPS6KA1Q15418 735 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 CAPN13Q6MZZ7 669 aaPredicted RBP17.69■□□□□ 0.42
SORT1-203ENST00000471996 SLC22A16Q86VW1 577 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 OTUD6BQ8N6M0 293 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 APCDD1LQ8NCL9 501 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 LRRN4CLQ8ND94 238 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 OR2M7Q8NG81 312 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 TTTY12Q9BZ98 90 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 B4GALT7Q9UBV7 327 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 LIPGQ9Y5X9 500 aa17.69■□□□□ 0.42
SORT1-203ENST00000471996 TRBV11-1A0A0K0K1C0 115 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 TCRBV16S1A1N1A0A5B0 115 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 SLC16A5O15375 505 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 GALR3O60755 368 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 GLSO94925 669 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 PTMAP06454 111 aaKnown RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 SLC35G6P0C7Q6 338 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 SKIV2L2P42285 1042 aaKnown RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 SSR4P51571 173 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 CLCN2P51788 898 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 OLR1P78380 273 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 KLF1Q13351 362 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 C1orf185Q5T7R7 199 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 RNF187Q5TA31 235 aaPredicted RBP17.68■□□□□ 0.42
SORT1-203ENST00000471996 RIPPLY2Q5TAB7 128 aa17.68■□□□□ 0.42
SORT1-203ENST00000471996 TRILQ7L0X0 811 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms