RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CRADDP78560 199 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SNX1Q13596 522 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 USP10Q14694 798 aaKnown RBP8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ABRAXAS2Q15018 415 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 HERC3Q15034 1050 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 MAPKAPK3Q16644 382 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SFT2D3Q587I9 215 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 FCRLBQ6BAA4 426 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 TMEM211Q6ICI0 200 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SPINK14Q6IE38 97 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 GSTA5Q7RTV2 222 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 GALNTL5Q7Z4T8 443 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ASPGQ86U10 573 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 REXO1L1PQ8IX06 675 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 TBC1D19Q8N5T2 526 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 RNF10Q8N5U6 811 aaKnown RBP8.58□□□□□ -1.04
CPSF4-211ENST00000471455 PPFIBP2Q8ND30 876 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ADAMTS18Q8TE60 1221 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 MAIP1Q8WWC4 291 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 C1orf54Q8WWF1 131 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 KCNJ9Q92806 393 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SDCCAG3Q96C92 435 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 MFSD3Q96ES6 412 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 PRAP1Q96NZ9 151 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SIGLEC12Q96PQ1 595 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ENKD1Q9H0I2 346 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ANKRD10Q9NXR5 420 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SAMD15Q9P1V8 674 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 SOX13Q9UN79 622 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ZKSCAN5Q9Y2L8 839 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 KLF13Q9Y2Y9 288 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-211ENST00000471455 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
CPSF4-211ENST00000471455 ADGRG4Q8IZF6 3080 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CTAGE9A4FU28 777 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 C19orf84I3L1E1 186 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SGK494L7N484 410 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 FCHO1O14526 889 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 GNB5O14775 395 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TFECO14948 347 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 NME2P1O60361 137 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 IL1RNP18510 177 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TPSB2P20231 275 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 NME2P22392 152 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 MGAT1P26572 445 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 ARNTP27540 789 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 RPL22P35268 128 aaKnown RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SKIV2L2P42285 1042 aaKnown RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CYB561P49447 251 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CLCN7P51798 805 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 OR4D2P58180 307 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SLC26A5P58743 744 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TBPL1P62380 186 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 MPP1Q00013 466 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 THOC5Q13769 683 aaKnown RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 KCNJ11Q14654 390 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TESK1Q15569 626 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TPSAB1Q15661 275 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CCNG2Q16589 344 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 ZNF470Q6ECI4 717 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 NEPROQ6NW34 567 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CASC4Q6P4E1 433 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 DRICH1Q6PGQ1 229 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 C8orf86Q6ZUL3 223 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 VN1R4Q7Z5H5 301 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 C17orf64Q86WR6 236 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 RPS19BP1Q86WX3 136 aaKnown RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 CILP2Q8IUL8 1156 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 PLD3Q8IV08 490 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SIAH3Q8IW03 269 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 PALM2Q8IXS6 379 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 LMNTD2Q8IXW0 634 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 PRELID2Q8N945 189 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 GPATCH11Q8N954 259 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 PLPP5Q8NEB5 264 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 GABPB2Q8TAK5 448 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 ZCCHC10Q8TBK6 192 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 ASB11Q8WXH4 323 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 BAG1Q99933 345 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-211ENST00000471455 TRIM51Q9BSJ1 452 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SYNPO2LQ9H987 977 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SYBUQ9NX95 663 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SLC22A7Q9Y694 548 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 ITPR3Q14573 2671 aa8.57□□□□□ -1.04
CPSF4-211ENST00000471455 SPG11Q96JI7 2443 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 MAGEB16A2A368 324 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 USP27XA6NNY8 438 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 GOLGA8KD6RF30 607 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 GOLGA8TH3BQL2 631 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 KLRC4-KLRK1H3BQV0 150 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 RDH16O75452 317 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 NEURL1O76050 574 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 TPOP07202 933 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 FHP07954 510 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 ETS1P14921 441 aa8.56□□□□□ -1.04
CPSF4-211ENST00000471455 IMPA1P29218 277 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms