RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MAZP56270 477 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 PHC1P78364 1004 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 HYAL2Q12891 473 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 RCN1Q15293 331 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 FXNQ16595 210 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 PGS1Q32NB8 556 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 RABL3Q5HYI8 236 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 CPTPQ5TA50 214 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 OR4F3Q6IEY1 312 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 FAM71E1Q6IPT2 247 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 NANOGP8Q6NSW7 305 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 KLHL35Q6PF15 583 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 R3HCC1LQ7Z5L2 792 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 TRIM73Q86UV7 250 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 PACS2Q86VP3 889 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 MSRB3Q8IXL7 192 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 MAML2Q8IZL2 1156 aaPredicted RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 ARL14Q8N4G2 192 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 RNF148Q8N7C7 305 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 DNAJB14Q8TBM8 379 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 NT5CQ8TCD5 201 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 C16orf78Q8WTQ4 265 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 GFM2Q969S9 779 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 ZUFSPQ96AP4 578 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 COQ8BQ96D53 544 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 THAP11Q96EK4 314 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 PPM1MQ96MI6 270 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 SH3GL1Q99961 368 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 DUSP26Q9BV47 211 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 BHLHE41Q9C0J9 482 aaPredicted RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 PAIP1Q9H074 479 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 ALG2Q9H553 416 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 REEP4Q9H6H4 257 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 DDX31Q9H8H2 851 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 NANOGQ9H9S0 305 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 LHX9Q9NQ69 397 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 ATAD3AQ9NVI7 634 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 SLAMF8Q9P0V8 285 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 SUSD2Q9UGT4 822 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 BTNL2Q9UIR0 455 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 POMT2Q9UKY4 750 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 EXO1Q9UQ84 846 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 AP3M1Q9Y2T2 418 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 L3MBTL1Q9Y468 752 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 CSNK1G3Q9Y6M4 447 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 A0A1B0GVT2 93 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 TMEM221A6NGB7 291 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 M0R296 226 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 RNASET2O00584 256 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 DFNA5O60443 496 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SCN2BO60939 215 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 KLHL18O94889 574 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 STAMBPO95630 424 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 GBAP04062 536 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 FURINP09958 794 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SLC35G6P0C7Q6 338 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 LAMP1P11279 417 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 PIM1P11309 404 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 GNSP15586 552 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 DDX5P17844 614 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 TCN1P20061 433 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 PTPN6P29350 595 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SSR2P43308 183 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CAPZBP47756 277 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 TRPC1P48995 793 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 DHPSP49366 369 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 GSK3BP49841 420 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 MAPK12P53778 367 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 WNT3P56703 355 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 TAS2R50P59544 299 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 STXBP1P61764 594 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 TRA2BP62995 288 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 AP2B1P63010 937 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 MS4A2Q01362 244 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CSTF1Q05048 431 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 LIPEQ05469 1076 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 KLC1Q07866 573 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CYP4F3Q08477 520 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CCDC6Q16204 474 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 DUOXA1Q1HG43 343 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 PLK5Q496M5 336 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 C14orf28Q4W4Y0 310 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 CCNYL2Q5T2Q4 361 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 ANXA8L1Q5VT79 327 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 PEAR1Q5VY43 1037 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 FCRL6Q6DN72 434 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 OR4C11Q6IEV9 310 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 ARMC6Q6NXE6 501 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 DNAJC14Q6Y2X3 702 aaPredicted RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 RNF44Q7L0R7 432 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 VN1R4Q7Z5H5 301 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 UBE3DQ7Z6J8 389 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 ASPGQ86U10 573 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 PTRH1Q86Y79 214 aaKnown RBP8.95□□□□□ -0.98
VPS52-216ENST00000471309 C1orf210Q8IVY1 113 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 FAM156AQ8NDB6 213 aa8.95□□□□□ -0.98
VPS52-216ENST00000471309 SRFBP1Q8NEF9 429 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms