RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CDH1P12830 882 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 ZNF37AP17032 561 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-211ENST00000471260 AGTR2P50052 363 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 HNMTP50135 292 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 SKP1P63208 163 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 CDKL1Q00532 357 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 HERC3Q15034 1050 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-211ENST00000471260 FBXO36Q8NEA4 188 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 OR51Q1Q8NH59 317 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 SSC4DQ8WTU2 575 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 PSMF1Q92530 271 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 HAS2Q92819 552 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 ALKBH8Q96BT7 664 aaKnown RBP12.77□□□□□ -0.37
HMGN1-211ENST00000471260 VPS39Q96JC1 886 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 PWWP2AQ96N64 755 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 OLFM1Q99784 485 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 TUBB6Q9BUF5 446 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 POPDC3Q9HBV1 291 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 SENP1Q9P0U3 644 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 SLC17A6Q9P2U8 582 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 C19orf25Q9UFG5 118 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-211ENST00000471260 CAPN7Q9Y6W3 813 aa12.77□□□□□ -0.37
HMGN1-211ENST00000471260 TRBC2A0A5B9 178 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 FEZF1A0PJY2 475 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 BLACEA4D250 179 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 LCMT2O60294 686 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 WFS1O76024 890 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 KLHL18O94889 574 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 SOX11P35716 441 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 SLC18A1P54219 525 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 MAT1AQ00266 395 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 IFT88Q13099 833 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 ELOAQ14241 798 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 CSHL1Q14406 222 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 PCOLCEQ15113 449 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 NR6A1Q15406 480 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 PPP1R3AQ16821 1122 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 SYT16Q17RD7 645 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 ZXDCQ2QGD7 858 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 EIF2S3LQ2VIR3 472 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 SBSNQ6UWP8 590 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 CYS1Q717R9 158 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 PIGWQ7Z7B1 504 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 TDRPQ86YL5 185 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 ANKMY2Q8IV38 441 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 PYROXD1Q8WU10 500 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 PYCR2Q96C36 320 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 IMMP1LQ96LU5 166 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 OR4K3Q96R72 315 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 CYTH2Q99418 400 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 MESP1Q9BRJ9 268 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 TACO1Q9BSH4 297 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 VN1R1Q9GZP7 353 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 CLK4Q9HAZ1 481 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 SH2B3Q9UQQ2 575 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 MRPS2Q9Y399 296 aaKnown RBP12.76□□□□□ -0.37
HMGN1-211ENST00000471260 KCNE2Q9Y6J6 123 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
HMGN1-211ENST00000471260 FAM95CA0A1B0GW59 222 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 ANKUB1A6NFN9 424 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 URADA6NGE7 173 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 FFAR3O14843 346 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 GPR42O15529 346 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 OR1F1O43749 312 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 GUCA1CO95843 209 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 IL1RNP18510 177 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 AHRP35869 848 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 XCR1P46094 333 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 EEF1A2Q05639 463 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 CDC16Q13042 620 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 FASTKD3Q14CZ7 662 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 INAQ16352 499 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 MINDY4Q4G0A6 757 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 SWT1Q5T5J6 900 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 FAAH2Q6GMR7 532 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 TMEM207Q6UWW9 146 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 LINC00696Q6ZRV3 163 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 PRSS41Q7RTY9 318 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 CPEB2Q7Z5Q1 589 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 ADAMTSL2Q86TH1 951 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 ZBED8Q8IZ13 594 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 AFAP1L2Q8N4X5 818 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 ST6GALNAC3Q8NDV1 305 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 PLPP5Q8NEB5 264 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 TRPV3Q8NET8 790 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 BRIX1Q8TDN6 353 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
HMGN1-211ENST00000471260 SLC5A11Q8WWX8 675 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 CDKL2Q92772 493 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 OR1F2PQ96R84 312 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 MCMBPQ9BTE3 642 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 RNF32Q9H0A6 362 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 PELI2Q9HAT8 420 aa12.75□□□□□ -0.37
HMGN1-211ENST00000471260 TEKT2Q9UIF3 430 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms