RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 DNAJB8Q8NHS0 232 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 PCNPQ8WW12 178 aaKnown RBP13.25□□□□□ -0.29
NPHP4-207ENST00000470763 SELENOMQ8WWX9 145 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 TMEM203Q969S6 136 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 ZSCAN5AQ9BUG6 496 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 CIPCQ9C0C6 399 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■■■□ 22.5
NPHP4-207ENST00000470763 GLTPQ9NZD2 209 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 NLKQ9UBE8 527 aa13.25□□□□□ -0.29
NPHP4-207ENST00000470763 PATJQ8NI35 1801 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 TSPAN9O75954 239 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 AP2A2O94973 939 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 RPS3P23396 243 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 MLLT1Q03111 559 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 TAF1AQ15573 450 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 SLC34A3Q8N130 599 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CFAP52Q8N1V2 620 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ATP6V1C2Q8NEY4 427 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 LKAAEAR1Q8TD35 194 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 APIPQ96GX9 242 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CDCA4Q9BXL8 241 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 KLHL21Q9UJP4 597 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 NDRG2Q9UN36 371 aaKnown RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 MAGEB17A8MXT2 336 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PLD2O14939 933 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 THP07101 528 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ACPPP15309 386 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 LPOP22079 712 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PSMA1P25786 263 aaKnown RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 HLA-DMAP28067 261 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 EVI2BP34910 448 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ARHGEF7Q14155 803 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CCSAPQ6IQ19 270 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 FAM171BQ6P995 826 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PTCHD4Q6ZW05 846 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CREB3L2Q70SY1 520 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 C9orf43Q8TAL5 461 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 GPR152Q8TDT2 470 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ACAT2Q9BWD1 397 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CD244Q9BZW8 370 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 TRIM45Q9H8W5 580 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 VPS9D1Q9Y2B5 631 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 DHRS7Q9Y394 339 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PTPRDP23468 1912 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CIB4A0PJX0 185 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 I3L521 148 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 J3KTA2 159 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 OR7A10O76100 309 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CCNB2O95067 398 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 ZNF250P15622 560 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CPN2P22792 545 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CSTF2P33240 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CRYBB2P43320 205 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 SLC9A3P48764 834 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 MAN2A2P49641 1150 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PTGES3Q15185 160 aaKnown RBP13.24□□□□□ -0.29
NPHP4-207ENST00000470763 LIPKQ5VXJ0 399 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PLAG1Q6DJT9 500 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 BBS7Q8IWZ6 715 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 TIGD4Q8IY51 512 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 CLDN19Q8N6F1 224 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 WDFY2Q96P53 400 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 C12orf10Q9HB07 376 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 RIMKLBQ9ULI2 386 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 POFUT2Q9Y2G5 429 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PDE4DIPQ5VU43 2346 aa13.24□□□□□ -0.29
NPHP4-207ENST00000470763 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 B3GAT3O94766 335 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 SRCP12931 536 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 EPB42P16452 691 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ZNF30P17039 623 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 SMPD1P17405 629 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 APEX1P27695 318 aaKnown RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 XKRXQ6PP77 449 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 PAQR6Q6TCH4 344 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 LIX1LQ8IVB5 337 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 OR6J1Q8NGC5 347 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 BOCQ9BWV1 1114 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 GALNT9Q9HCQ5 603 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 DIABLOQ9NR28 239 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 TLR8Q9NR97 1041 aaKnown RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ING3Q9NXR8 418 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 FBXO9Q9UK97 447 aaPredicted RBP13.23□□□□□ -0.29
NPHP4-207ENST00000470763 TLR6Q9Y2C9 796 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 ZNF670-ZNF695F2Z2N8 137 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 PRLP01236 227 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 PDGFAP04085 211 aa13.23□□□□□ -0.29
NPHP4-207ENST00000470763 SCG5P05408 212 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms