RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 NOCTQ9UK39 431 aaKnown RBP4.43□□□□□ -1.7
SSB-209ENST00000470621 CSAG2Q9Y5P2 127 aa4.43□□□□□ -1.7
SSB-209ENST00000470621 POMT1Q9Y6A1 747 aa4.43□□□□□ -1.7
SSB-209ENST00000470621 COL5A2P05997 1499 aaPredicted RBP4.43□□□□□ -1.7
SSB-209ENST00000470621 IGHV4-30-2A0A087WSY4 118 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 A0A1B0GVY2 172 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 A8MXK9 166 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 PGRMC2O15173 223 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 MT-ND2P03891 347 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 RPLP0P05388 317 aaKnown RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 HSP90AA1P07900 732 aaKnown RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 VIMP08670 466 aaKnown RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 OR3A1P47881 315 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 SPECC1Q5M775 1068 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 MPP7Q5T2T1 576 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 C3P1Q6ZMU1 363 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 CREBRFQ8IUR6 639 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 DND1Q8IYX4 353 aaKnown RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 TDHQ8IZJ6 230 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 OR52B6Q8NGF0 335 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 OR10G7Q8NGN6 311 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 BSCL2Q96G97 398 aaPredicted RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 ZMAT2Q96NC0 199 aaKnown RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 CTSZQ9UBR2 303 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.42□□□□□ -1.7
SSB-209ENST00000470621 SATB2Q9UPW6 733 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 SMAD5-AS1Q9Y6J3 95 aa4.42□□□□□ -1.7
SSB-209ENST00000470621 COL2A1P02458 1487 aaPredicted RBP4.42□□□□□ -1.7
SSB-209ENST00000470621 hCG_38984A0A1B0GV85 526 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 MOCS2O96007 188 aaPredicted RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 IGHV3-13P01766 116 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 C9P02748 559 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 RPN1P04843 607 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 SP9P0CG40 484 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 NDST2P52849 883 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 FOLH1Q04609 750 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 ZNF239Q16600 458 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 CDO1Q16878 200 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 KLHL10Q6JEL2 608 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 TRMT11Q7Z4G4 463 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 GLRX5Q86SX6 157 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 SLC47A2Q86VL8 602 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 METTL23Q86XA0 190 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 ABHD12Q8N2K0 398 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 TEX26Q8N6G2 289 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 GRK7Q8WTQ7 553 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 GAL3ST4Q96RP7 486 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 C10orf88Q9H8K7 445 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 ZCCHC17Q9NP64 241 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 EXOC1Q9NV70 894 aa4.41□□□□□ -1.7
SSB-209ENST00000470621 HBS1LQ9Y450 684 aaKnown RBP4.41□□□□□ -1.7
SSB-209ENST00000470621 SRRM5B3KS81 715 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 NPIPA3F8WFD2 350 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SIGLEC5O15389 551 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 ST8SIA3O43173 380 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SIX3O95343 332 aaPredicted RBP4.4□□□□□ -1.71
SSB-209ENST00000470621 POP4O95707 220 aaKnown RBP4.4□□□□□ -1.71
SSB-209ENST00000470621 HOXC13P31276 330 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 GPR183P32249 361 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SLC8A3P57103 927 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 LRRC37A5PQ49AS3 106 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SPINK14Q6IE38 97 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 OR9Q2Q8NGE9 314 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SAP25Q8TEE9 199 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 SSC4DQ8WTU2 575 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 CORO2AQ92828 525 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 PDLIM5Q96HC4 596 aaKnown RBP4.4□□□□□ -1.71
SSB-209ENST00000470621 LURAP1Q96LR2 239 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 IL12RB2Q99665 862 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 TRIM6Q9C030 488 aaPredicted RBP4.4□□□□□ -1.71
SSB-209ENST00000470621 DPEP2Q9H4A9 486 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 PANK3Q9H999 370 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 C3orf14Q9HBI5 128 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 IL1RAPQ9NPH3 570 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 TMOD3Q9NYL9 352 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 PILRAQ9UKJ1 303 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 NCKAP1Q9Y2A7 1128 aa4.4□□□□□ -1.71
SSB-209ENST00000470621 ACSL4O60488 711 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 HPRP00739 348 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 CAPGP40121 348 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 KCNJ1P48048 391 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 KIAA0141Q14154 515 aaPredicted RBP4.39□□□□□ -1.71
SSB-209ENST00000470621 ZNF146Q15072 292 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 MS4A18Q3C1V0 323 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 MEX3DQ86XN8 651 aaKnown RBP4.39□□□□□ -1.71
SSB-209ENST00000470621 DZIP1Q86YF9 867 aaKnown RBP4.39□□□□□ -1.71
SSB-209ENST00000470621 AMER3Q8N944 861 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 CD99L2Q8TCZ2 262 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 RASL10AQ92737 203 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 MR1Q95460 341 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 ZNF597Q96LX8 424 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 FOXN4Q96NZ1 517 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 TSSK2Q96PF2 358 aa4.39□□□□□ -1.71
SSB-209ENST00000470621 RAB11FIP5Q9BXF6 653 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms